RNA id: TCONS_00035395


Basic Information

Item Value
RNA id TCONS_00035395
length 117
RNA type rRNA
GC content 0.50
exon number 1
gene id XLOC_017955
representative True

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 13369227 ~ 13369343 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TTACACAgacatgtcaccctgcagcctaagaccggttacttactgaagctaagcagagctgagcctgatcagtacctggatgggagaccacatgggaaatctAGGAAgcagttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000175452

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00036810 lncRNA downstream 56217 13309282 ~ 13313010 (-) False XLOC_017953
TCONS_00036809 lncRNA downstream 56217 13309282 ~ 13313010 (-) True XLOC_017953
TCONS_00036808 lncRNA downstream 56280 13309282 ~ 13312947 (-) False XLOC_017953
TCONS_00036457 lncRNA downstream 441272 12927182 ~ 12927955 (-) True XLOC_017949
TCONS_00036456 lncRNA downstream 512181 12854967 ~ 12857046 (-) True XLOC_017948
TCONS_00035405 lncRNA upstream 285242 13654585 ~ 13659433 (-) False XLOC_017958
TCONS_00035410 lncRNA upstream 525575 13894918 ~ 13896672 (-) True XLOC_017961
TCONS_00036811 lncRNA upstream 628968 13998311 ~ 14001001 (-) True XLOC_017962
TCONS_00035414 lncRNA upstream 657510 14026853 ~ 14027677 (-) False XLOC_017964
TCONS_00035415 lncRNA upstream 657971 14027314 ~ 14028035 (-) True XLOC_017964
TCONS_00035392 mRNA downstream 226870 13020673 ~ 13142357 (-) True XLOC_017951
TCONS_00035391 mRNA downstream 228881 13020673 ~ 13140346 (-) False XLOC_017951
TCONS_00035390 mRNA downstream 228918 13020489 ~ 13140309 (-) False XLOC_017951
TCONS_00035388 mRNA downstream 432366 12936096 ~ 12936861 (-) True XLOC_017950
TCONS_00035386 mRNA downstream 726542 12566101 ~ 12642685 (-) True XLOC_017942
TCONS_00035396 mRNA upstream 195588 13564931 ~ 13624618 (-) False XLOC_017956
TCONS_00035397 mRNA upstream 198717 13568060 ~ 13625588 (-) False XLOC_017956
TCONS_00035398 mRNA upstream 224137 13593480 ~ 13623882 (-) False XLOC_017956
TCONS_00035399 mRNA upstream 241414 13610757 ~ 13624008 (-) True XLOC_017956
TCONS_00035400 mRNA upstream 263183 13632526 ~ 13640598 (-) False XLOC_017957
TCONS_00035393 other downstream 160475 13204066 ~ 13208752 (-) True XLOC_017952
TCONS_00035389 other downstream 229000 13020489 ~ 13140227 (-) False XLOC_017951
TCONS_00035387 other downstream 761806 12605718 ~ 12607421 (-) True XLOC_017943
TCONS_00035374 other downstream 3315526 10053405 ~ 10053701 (-) True XLOC_017928
TCONS_00035371 other downstream 3462843 9906268 ~ 9906384 (-) True XLOC_017925
TCONS_00035409 other upstream 449052 13818395 ~ 13818510 (-) True XLOC_017960
TCONS_00035412 other upstream 634131 14003474 ~ 14012826 (-) True XLOC_017963
TCONS_00035421 other upstream 1085565 14454908 ~ 14455626 (-) True XLOC_017968
TCONS_00035480 other upstream 4273466 17642809 ~ 17642923 (-) True XLOC_017998
TCONS_00035481 other upstream 4415104 17784447 ~ 17784568 (-) True XLOC_017999