RNA id: TCONS_00035409


Basic Information

Item Value
RNA id TCONS_00035409
length 116
RNA type rRNA
GC content 0.50
exon number 1
gene id XLOC_017960
representative True

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 13818395 ~ 13818510 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gctGGCAGCTAACTTTTtgaaactctcacatggtcaccccacagaagctaaacagggctgcccctggtcagtacctggatgggagaccacatgagaaagctaggttgATGACAAAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000178091

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00035405 lncRNA downstream 158962 13654585 ~ 13659433 (-) False XLOC_017958
TCONS_00036810 lncRNA downstream 505385 13309282 ~ 13313010 (-) False XLOC_017953
TCONS_00036809 lncRNA downstream 505385 13309282 ~ 13313010 (-) True XLOC_017953
TCONS_00036808 lncRNA downstream 505448 13309282 ~ 13312947 (-) False XLOC_017953
TCONS_00036457 lncRNA downstream 890440 12927182 ~ 12927955 (-) True XLOC_017949
TCONS_00035410 lncRNA upstream 76408 13894918 ~ 13896672 (-) True XLOC_017961
TCONS_00036811 lncRNA upstream 179801 13998311 ~ 14001001 (-) True XLOC_017962
TCONS_00035414 lncRNA upstream 208343 14026853 ~ 14027677 (-) False XLOC_017964
TCONS_00035415 lncRNA upstream 208804 14027314 ~ 14028035 (-) True XLOC_017964
TCONS_00035424 lncRNA upstream 641589 14460099 ~ 14462995 (-) True XLOC_017969
TCONS_00035407 mRNA downstream 43569 13750537 ~ 13774826 (-) False XLOC_017959
TCONS_00035408 mRNA downstream 52646 13754869 ~ 13765749 (-) True XLOC_017959
TCONS_00035406 mRNA downstream 95881 13673384 ~ 13722514 (-) True XLOC_017958
TCONS_00035403 mRNA downstream 144829 13647987 ~ 13673566 (-) False XLOC_017958
TCONS_00035402 mRNA downstream 157628 13647987 ~ 13660767 (-) False XLOC_017958
TCONS_00035411 mRNA upstream 184550 14003060 ~ 14012859 (-) False XLOC_017963
TCONS_00035413 mRNA upstream 196303 14014813 ~ 14054083 (-) False XLOC_017964
TCONS_00035416 mRNA upstream 278348 14096858 ~ 14114078 (-) False XLOC_017965
TCONS_00035417 mRNA upstream 279560 14098070 ~ 14114151 (-) True XLOC_017965
TCONS_00035418 mRNA upstream 325779 14144289 ~ 14206698 (-) False XLOC_017966
TCONS_00035395 other downstream 449052 13369227 ~ 13369343 (-) True XLOC_017955
TCONS_00035393 other downstream 609643 13204066 ~ 13208752 (-) True XLOC_017952
TCONS_00035389 other downstream 678168 13020489 ~ 13140227 (-) False XLOC_017951
TCONS_00035387 other downstream 1210974 12605718 ~ 12607421 (-) True XLOC_017943
TCONS_00035374 other downstream 3764694 10053405 ~ 10053701 (-) True XLOC_017928
TCONS_00035412 other upstream 184964 14003474 ~ 14012826 (-) True XLOC_017963
TCONS_00035421 other upstream 636398 14454908 ~ 14455626 (-) True XLOC_017968
TCONS_00035480 other upstream 3824299 17642809 ~ 17642923 (-) True XLOC_017998
TCONS_00035481 other upstream 3965937 17784447 ~ 17784568 (-) True XLOC_017999
TCONS_00035486 other upstream 4535899 18354409 ~ 18382352 (-) False XLOC_018004