RNA id: TU765395



Basic Information


Item Value
RNA id TU765395
length 357
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G671873
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 10136710 ~ 10137160 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tctctctctatgtctctctctctctctctctctctctctctctctctctctctctctgatctcctcTAGTTGAGGTGGCTAggggtgaaaagagagagagaggcctgtttgaTGTGCAGACGGTGGCCAATTAGAACCAGGCACCAAGACCCTTTATCTCAGGCTGTATCTCATTCTGTTTGGTTGTGGGCAAATCAGAAGGGATGAATCACAGCACAGCTTGCAGACCCATAAGGTGAAGATAGTTTGGGTATTGGTTTGTATGACAAAGATATTCTAAGGCATCTTTGGAGGTGTTGTGAATATCAAGACTCATTTTTCAGTGCATTCACCTGGGTTATTATAGTAACCTAAAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU765394 lncRNA downstream 1415 10134788 ~ 10135295 (-) True G671872
TU765393 lncRNA downstream 2926 10133374 ~ 10133784 (-) True G671871
TU765392 lncRNA downstream 3559 10132431 ~ 10133151 (-) True G671870
TU765386 lncRNA downstream 7728 10128694 ~ 10128982 (-) True G671868
TU765329 lncRNA downstream 14737 10117494 ~ 10121973 (-) True G671820
TU765396 lncRNA upstream 138 10137298 ~ 10137522 (-) True G671874
TU765402 lncRNA upstream 14097 10151257 ~ 10151979 (-) True G671879
TU765450 lncRNA upstream 109020 10246180 ~ 10246388 (-) True G671925
TU765452 lncRNA upstream 117543 10254703 ~ 10254927 (-) True G671927
TU765463 lncRNA upstream 129439 10266599 ~ 10267809 (-) True G671938
XM_021611477.2 mRNA downstream 50300 10080837 ~ 10086410 (-) True LOC110529344
XM_021611478.2 mRNA downstream 50307 10080837 ~ 10086403 (-) False LOC110529344
XM_036984715.1 mRNA downstream 51124 10080837 ~ 10085586 (-) False LOC110529344
XM_036984711.1 mRNA downstream 143258 9825982 ~ 9993452 (-) False kif26aa
XM_036984725.1 mRNA upstream 3509 10140669 ~ 10148583 (-) True myh6
XM_021611485.2 mRNA upstream 15635 10152795 ~ 10186202 (-) False LOC110529348
XM_021611484.2 mRNA upstream 15635 10152795 ~ 10191112 (-) True LOC110529348
XM_036984727.1 mRNA upstream 57690 10194850 ~ 10212507 (-) False LOC110529349
XM_036984726.1 mRNA upstream 57690 10194850 ~ 10212544 (-) False LOC110529349
TU765319 other downstream 14737 10115090 ~ 10121973 (-) False G671820
TU765333 other downstream 14737 10115090 ~ 10121973 (-) False G671820
TU765324 other downstream 14808 10115090 ~ 10121902 (-) False G671820
TU765218 other downstream 163898 9971682 ~ 9972812 (-) False kif26aa
TU766004 other upstream 601064 10738224 ~ 10738686 (-) True G672436
TU766687 other upstream 1207313 11344473 ~ 11344782 (-) True G673053
TU767508 other upstream 1847674 11984834 ~ 11990363 (-) False LOC110529377
TU767500 other upstream 1848315 11985475 ~ 11994689 (-) False LOC110529377
TU767509 other upstream 1848315 11985475 ~ 11997491 (-) False LOC110529377

Expression Profile