RNA id: TU767671



Basic Information


Item Value
RNA id TU767671
length 288
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G673941
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 12155596 ~ 12155883 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cgacagatttatCACCTAGTCGGCTAGGGGATTCAAAACAGCGACCTTTCGATtaatggcccaatgctcttaaccacgaGGCAACCTGCCACCCATTATAATAGTGACGGATGCTGATACAGTTTTAGAAGTTCCATTAGGAGGGAGTTGAGGATTTTACCCACTGGCTTTACAGCACTGGGCATGCCAGTATCATAACCAAGGACTGTGGAAATTACAGTAAAACTTCTCTCCAGAGACACGCTAGCAATGACGTCATTTTTGTCTGCCATAGTTTATATTTAGACC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU767502 lncRNA downstream 158105 11985475 ~ 11997491 (-) False LOC110529377
TU767505 lncRNA downstream 158105 11985475 ~ 11997491 (-) False LOC110529377
TU767514 lncRNA downstream 170911 11984099 ~ 11984685 (-) True G673811
TU767611 lncRNA downstream 189484 11965847 ~ 11966112 (-) True G673887
TU767446 lncRNA downstream 241396 11883093 ~ 11914200 (-) True LOC110529372
TU767672 lncRNA upstream 288 12156171 ~ 12156395 (-) True G673942
TU767675 lncRNA upstream 49167 12205050 ~ 12206365 (-) False G673943
TU767673 lncRNA upstream 53293 12209176 ~ 12210248 (-) True G673943
TU767698 lncRNA upstream 54759 12210642 ~ 12210867 (-) True G673966
TU767587 lncRNA upstream 60952 12216835 ~ 12224401 (-) True G673866
XM_021611520.2 mRNA downstream 126287 12026183 ~ 12029309 (-) True LOC110529379
XM_036984764.1 mRNA downstream 139850 12013722 ~ 12015746 (-) True LOC110529184
XR_005052777.1 mRNA downstream 165075 11986100 ~ 11990521 (-) False LOC110529377
XM_021611516.2 mRNA downstream 165118 11985446 ~ 11990478 (-) False LOC110529377
XR_002474370.2 mRNA downstream 269747 11883060 ~ 11885849 (-) False LOC110529372
XM_021611530.2 mRNA upstream 5890 12161773 ~ 12163688 (-) True LOC110529387
XM_036984779.1 mRNA upstream 160723 12316606 ~ 12329268 (-) False mideasa
XM_036984780.1 mRNA upstream 160723 12316606 ~ 12330034 (-) False mideasa
XM_036984778.1 mRNA upstream 160723 12316606 ~ 12330035 (-) False mideasa
XM_036984781.1 mRNA upstream 160723 12316606 ~ 12330035 (-) False mideasa
TU767588 other downstream 13602 12140370 ~ 12141994 (-) True G673867
TU767583 other downstream 129854 12018616 ~ 12025742 (-) True G673863
TU767509 other downstream 158105 11985475 ~ 11997491 (-) False LOC110529377
TU767500 other downstream 160907 11985475 ~ 11994689 (-) False LOC110529377
TU767510 other downstream 165152 11985475 ~ 11990444 (-) True LOC110529377
TU767753 other upstream 127954 12283837 ~ 12284220 (-) True G674015
TU768544 other upstream 459997 12615880 ~ 12697323 (-) True lpgat1
TU769232 other upstream 1219056 13374939 ~ 13398443 (-) False LOC110529426
TU769234 other upstream 1219056 13374939 ~ 13378281 (-) True LOC110529426
TU769335 other upstream 1328210 13484093 ~ 13484934 (-) True G675413

Expression Profile