RNA id: TU769014



Basic Information


Item Value
RNA id TU769014
length 208
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G675151
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 13276265 ~ 13276472 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTCTCTACAAAGGGTGGTTGTGGATCTGTGACGTGACAATCTACAAAagaccctgactcaaactgcctCCCAAAAAGTCAGCCTGGTATCTCTTACCACAGACACTGTGTGATACATACAACAAGCTATTCTCTTGACTCTACAAGGGCATCTGCCACTGTCTTTTCCAGACAAGTTCTACAACTGAGCGTCTACAATGGGCCCACTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU768960 lncRNA downstream 13608 13262446 ~ 13262657 (-) True G675111
TU768959 lncRNA downstream 14183 13261854 ~ 13262082 (-) True G675110
TU768925 lncRNA downstream 36714 13239268 ~ 13239551 (-) True G675077
TU768896 lncRNA downstream 70917 13203725 ~ 13205348 (-) True G675049
TU768901 lncRNA downstream 76360 13199636 ~ 13199905 (-) True G675053
TU769021 lncRNA upstream 15764 13292236 ~ 13294834 (-) True G675154
TU769027 lncRNA upstream 23420 13299892 ~ 13300705 (-) True G675157
TU769045 lncRNA upstream 56216 13332688 ~ 13332904 (-) True G675174
TU769268 lncRNA upstream 82148 13358620 ~ 13359153 (-) True G675351
TU769270 lncRNA upstream 94396 13370868 ~ 13371324 (-) True G675353
XR_005052779.1 mRNA downstream 111568 13159465 ~ 13164697 (-) True LOC110529421
XM_021611574.2 mRNA downstream 276361 12951277 ~ 12999904 (-) True enpp1
XM_036986824.1 mRNA downstream 333130 12929263 ~ 12943135 (-) True sytl3
XM_036986823.1 mRNA downstream 568866 12697506 ~ 12707399 (-) False ints7
XM_036984801.1 mRNA downstream 578942 12615879 ~ 12697323 (-) False lpgat1
XM_021611580.2 mRNA upstream 43983 13320455 ~ 13331256 (-) False LOC110529423
XM_036984806.1 mRNA upstream 43983 13320455 ~ 13331260 (-) True LOC110529423
XM_021611587.2 mRNA upstream 99070 13375542 ~ 13384455 (-) False LOC110529426
XM_021611598.2 mRNA upstream 221546 13498018 ~ 13509334 (-) False tmem151ba
NM_001124231.1 mRNA upstream 275776 13552248 ~ 13558656 (-) False hsp90ab1
TU768544 other downstream 578942 12615880 ~ 12697323 (-) True lpgat1
TU767753 other downstream 992045 12283837 ~ 12284220 (-) True G674015
TU767588 other downstream 1134271 12140370 ~ 12141994 (-) True G673867
TU767583 other downstream 1250523 12018616 ~ 12025742 (-) True G673863
TU767510 other downstream 1285821 11985475 ~ 11990444 (-) True LOC110529377
TU769232 other upstream 98467 13374939 ~ 13398443 (-) False LOC110529426
TU769234 other upstream 98467 13374939 ~ 13378281 (-) True LOC110529426
TU769335 other upstream 207621 13484093 ~ 13484934 (-) True G675413
TU769337 other upstream 209207 13485679 ~ 13486137 (-) True G675415
TU769793 other upstream 707154 13983626 ~ 13986108 (-) False G675834

Expression Profile