RNA id: TU769268


Basic Information

Item Value
RNA id TU769268
length 534
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G675351
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 13358620 ~ 13359153 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

taagtctttgctaggtaaagccccgccttatctcagctcactggtcaccatagcaacacccacctgtagcacgcgctccagcaggtacatttcactggtcatccccaaagtcaacacttcctttggccgcctttccttccagttctctgctgccaatgactgtaacgaattgcataaatcactgaagctggagtcttatatctccctctctaactttaagcatcagctgtcagagcaacttaCCGATCACTGGACCTATACACAGCCAatttgtaaatagcacacccaactacttcgtccccatattgttatttatctttttgctcttttgcaccccagtatctctacttgcacatcatcatctgcacatatatcactccagtgttaatgctaaattccaattatttcaccactatggcctatttattgccttacctccctaatcttctacatttgcacacactgtacatagatttttctattgtgttattgattgtacgtttgtttatttgtaactctgtgttgttgtttttg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU769045 lncRNA downstream 25716 13332688 ~ 13332904 (-) True G675174
TU769027 lncRNA downstream 57915 13299892 ~ 13300705 (-) True G675157
TU769021 lncRNA downstream 63786 13292236 ~ 13294834 (-) True G675154
TU769014 lncRNA downstream 82148 13276265 ~ 13276472 (-) True G675151
TU768960 lncRNA downstream 95963 13262446 ~ 13262657 (-) True G675111
TU769270 lncRNA upstream 11715 13370868 ~ 13371324 (-) True G675353
TU769231 lncRNA upstream 13877 13373030 ~ 13451428 (-) False LOC110529426
TU769278 lncRNA upstream 43286 13402439 ~ 13403248 (-) True G675360
TU769245 lncRNA upstream 50595 13409748 ~ 13415280 (-) True G675337
TU769303 lncRNA upstream 63928 13423081 ~ 13423661 (-) True G675385
XM_036984806.1 mRNA downstream 27360 13320455 ~ 13331260 (-) True LOC110529423
XM_021611580.2 mRNA downstream 27364 13320455 ~ 13331256 (-) False LOC110529423
XR_005052779.1 mRNA downstream 193923 13159465 ~ 13164697 (-) True LOC110529421
XM_021611574.2 mRNA downstream 358716 12951277 ~ 12999904 (-) True enpp1
XM_036986824.1 mRNA downstream 415485 12929263 ~ 12943135 (-) True sytl3
XM_021611587.2 mRNA upstream 16389 13375542 ~ 13384455 (-) False LOC110529426
XM_021611598.2 mRNA upstream 138865 13498018 ~ 13509334 (-) False tmem151ba
NM_001124231.1 mRNA upstream 193095 13552248 ~ 13558656 (-) False hsp90ab1
XM_021611214.2 mRNA upstream 193962 13553115 ~ 13558751 (-) True hsp90ab1
XM_021611605.2 mRNA upstream 239223 13598376 ~ 13601561 (-) True LOC110529434
TU768544 other downstream 661297 12615880 ~ 12697323 (-) True lpgat1
TU767753 other downstream 1074400 12283837 ~ 12284220 (-) True G674015
TU767588 other downstream 1216626 12140370 ~ 12141994 (-) True G673867
TU767583 other downstream 1332878 12018616 ~ 12025742 (-) True G673863
TU767510 other downstream 1368176 11985475 ~ 11990444 (-) True LOC110529377
TU769232 other upstream 15786 13374939 ~ 13398443 (-) False LOC110529426
TU769234 other upstream 15786 13374939 ~ 13378281 (-) True LOC110529426
TU769335 other upstream 124940 13484093 ~ 13484934 (-) True G675413
TU769337 other upstream 126526 13485679 ~ 13486137 (-) True G675415
TU769793 other upstream 624473 13983626 ~ 13986108 (-) False G675834

Expression Profile