RNA id: TU769619



Basic Information


Item Value
RNA id TU769619
length 213
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G675668
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 13822051 ~ 13822263 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtgcccctggctatctgtaatgatgtctgagtgttggagtgtgcccctggctatctgtaatgatgtctgagtgttggagtgtgcccctggctatctgtaatgatgtctgagtgttggagtgcgcccctggctatctgtaatgatgtctgagtgttggagtgtgcccctggctatctgtaatgatgtctgagtgttggagtgcgcccctggcta

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU769602 lncRNA downstream 17244 13804582 ~ 13804807 (-) True G675651
TU769538 lncRNA downstream 65394 13756412 ~ 13756657 (-) True G675588
TU769506 lncRNA downstream 102958 13716234 ~ 13719093 (-) True G675556
TU769451 lncRNA downstream 128183 13693660 ~ 13693868 (-) True G675511
TU769395 lncRNA downstream 207623 13614219 ~ 13614428 (-) True G675463
TU769621 lncRNA upstream 1892 13824155 ~ 13824425 (-) True G675670
TU769626 lncRNA upstream 5287 13827550 ~ 13827867 (-) True G675675
TU769695 lncRNA upstream 62991 13885254 ~ 13885464 (-) True G675742
TU769696 lncRNA upstream 64288 13886551 ~ 13886751 (-) True G675743
TU769766 lncRNA upstream 142243 13964506 ~ 13964732 (-) True G675810
XM_021611606.2 mRNA downstream 189195 13626761 ~ 13632856 (-) True LOC110529435
XM_021611607.2 mRNA downstream 189196 13626761 ~ 13632855 (-) False LOC110529435
XM_021611605.2 mRNA downstream 220490 13598376 ~ 13601561 (-) True LOC110529434
XM_021611214.2 mRNA downstream 263300 13553115 ~ 13558751 (-) True hsp90ab1
NM_001124231.1 mRNA downstream 263395 13552248 ~ 13558656 (-) False hsp90ab1
XM_036984822.1 mRNA upstream 518237 14340500 ~ 14389518 (-) False LOC110529441
XM_036984821.1 mRNA upstream 518237 14340500 ~ 14392658 (-) False LOC110529441
XM_036984823.1 mRNA upstream 518237 14340500 ~ 14392658 (-) False LOC110529441
XM_036984824.1 mRNA upstream 518237 14340500 ~ 14392658 (-) False LOC110529441
XM_036984825.1 mRNA upstream 518237 14340500 ~ 14392658 (-) False LOC110529441
TU769337 other downstream 335914 13485679 ~ 13486137 (-) True G675415
TU769335 other downstream 337117 13484093 ~ 13484934 (-) True G675413
TU769232 other downstream 423608 13374939 ~ 13398443 (-) False LOC110529426
TU769234 other downstream 443770 13374939 ~ 13378281 (-) True LOC110529426
TU768544 other downstream 1124728 12615880 ~ 12697323 (-) True lpgat1
TU769793 other upstream 161363 13983626 ~ 13986108 (-) False G675834
TU769790 other upstream 161581 13983844 ~ 13986108 (-) True G675834
TU770045 other upstream 384724 14206987 ~ 14207625 (-) True G676077
TU770156 other upstream 465586 14287849 ~ 14288345 (-) True G676178
TU770677 other upstream 689327 14511590 ~ 14516528 (-) True G676635

Expression Profile