RNA id: TU769695



Basic Information


Item Value
RNA id TU769695
length 211
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G675742
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 13885254 ~ 13885464 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


atcataaagcatacactccctgcccttcctcttcccagagaggtgtttaccTCTGTCGGcacgatgcatggagaagcccggtggctgaactGATTATGACAAAatatccagagagagccatgtttctgtgaaacagagaatgtcaCAATCTCGGAAAGGCAACCCTACtcgaatttcatctaccttgttggcaagagactggacattggcg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU769626 lncRNA downstream 57387 13827550 ~ 13827867 (-) True G675675
TU769621 lncRNA downstream 60829 13824155 ~ 13824425 (-) True G675670
TU769619 lncRNA downstream 62991 13822051 ~ 13822263 (-) True G675668
TU769602 lncRNA downstream 80447 13804582 ~ 13804807 (-) True G675651
TU769538 lncRNA downstream 128597 13756412 ~ 13756657 (-) True G675588
TU769696 lncRNA upstream 1087 13886551 ~ 13886751 (-) True G675743
TU769766 lncRNA upstream 79042 13964506 ~ 13964732 (-) True G675810
TU769782 lncRNA upstream 93024 13978488 ~ 13978712 (-) True G675826
TU769796 lncRNA upstream 103562 13989026 ~ 13989305 (-) True G675837
TU769800 lncRNA upstream 104943 13990407 ~ 13990640 (-) True G675841
XM_021611606.2 mRNA downstream 252398 13626761 ~ 13632856 (-) True LOC110529435
XM_021611607.2 mRNA downstream 252399 13626761 ~ 13632855 (-) False LOC110529435
XM_021611605.2 mRNA downstream 283693 13598376 ~ 13601561 (-) True LOC110529434
XM_021611214.2 mRNA downstream 326503 13553115 ~ 13558751 (-) True hsp90ab1
NM_001124231.1 mRNA downstream 326598 13552248 ~ 13558656 (-) False hsp90ab1
XM_036984822.1 mRNA upstream 455036 14340500 ~ 14389518 (-) False LOC110529441
XM_036984821.1 mRNA upstream 455036 14340500 ~ 14392658 (-) False LOC110529441
XM_036984823.1 mRNA upstream 455036 14340500 ~ 14392658 (-) False LOC110529441
XM_036984824.1 mRNA upstream 455036 14340500 ~ 14392658 (-) False LOC110529441
XM_036984825.1 mRNA upstream 455036 14340500 ~ 14392658 (-) False LOC110529441
TU769337 other downstream 399117 13485679 ~ 13486137 (-) True G675415
TU769335 other downstream 400320 13484093 ~ 13484934 (-) True G675413
TU769232 other downstream 486811 13374939 ~ 13398443 (-) False LOC110529426
TU769234 other downstream 506973 13374939 ~ 13378281 (-) True LOC110529426
TU768544 other downstream 1187931 12615880 ~ 12697323 (-) True lpgat1
TU769793 other upstream 98162 13983626 ~ 13986108 (-) False G675834
TU769790 other upstream 98380 13983844 ~ 13986108 (-) True G675834
TU770045 other upstream 321523 14206987 ~ 14207625 (-) True G676077
TU770156 other upstream 402385 14287849 ~ 14288345 (-) True G676178
TU770677 other upstream 626126 14511590 ~ 14516528 (-) True G676635

Expression Profile