RNA id: TU769696



Basic Information


Item Value
RNA id TU769696
length 201
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G675743
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 13886551 ~ 13886751 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ggtattatttttgtccagatgggatagggcagtgtgcagtgtgatggcgattacgtcatctgtggacctgttggggcggtatgcaaactgaagtgggtctagggtggcaggtaaggtggcagtgatatgatccttgactagcctctcaaagcacttcatgatgactgaagtAAGTGCtatggggcagtagtcatttaacTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU769695 lncRNA downstream 1087 13885254 ~ 13885464 (-) True G675742
TU769626 lncRNA downstream 58684 13827550 ~ 13827867 (-) True G675675
TU769621 lncRNA downstream 62126 13824155 ~ 13824425 (-) True G675670
TU769619 lncRNA downstream 64288 13822051 ~ 13822263 (-) True G675668
TU769602 lncRNA downstream 81744 13804582 ~ 13804807 (-) True G675651
TU769766 lncRNA upstream 77755 13964506 ~ 13964732 (-) True G675810
TU769782 lncRNA upstream 91737 13978488 ~ 13978712 (-) True G675826
TU769796 lncRNA upstream 102275 13989026 ~ 13989305 (-) True G675837
TU769800 lncRNA upstream 103656 13990407 ~ 13990640 (-) True G675841
TU769801 lncRNA upstream 104405 13991156 ~ 13991384 (-) True G675842
XM_021611606.2 mRNA downstream 253695 13626761 ~ 13632856 (-) True LOC110529435
XM_021611607.2 mRNA downstream 253696 13626761 ~ 13632855 (-) False LOC110529435
XM_021611605.2 mRNA downstream 284990 13598376 ~ 13601561 (-) True LOC110529434
XM_021611214.2 mRNA downstream 327800 13553115 ~ 13558751 (-) True hsp90ab1
NM_001124231.1 mRNA downstream 327895 13552248 ~ 13558656 (-) False hsp90ab1
XM_036984822.1 mRNA upstream 453749 14340500 ~ 14389518 (-) False LOC110529441
XM_036984821.1 mRNA upstream 453749 14340500 ~ 14392658 (-) False LOC110529441
XM_036984823.1 mRNA upstream 453749 14340500 ~ 14392658 (-) False LOC110529441
XM_036984824.1 mRNA upstream 453749 14340500 ~ 14392658 (-) False LOC110529441
XM_036984825.1 mRNA upstream 453749 14340500 ~ 14392658 (-) False LOC110529441
TU769337 other downstream 400414 13485679 ~ 13486137 (-) True G675415
TU769335 other downstream 401617 13484093 ~ 13484934 (-) True G675413
TU769232 other downstream 488108 13374939 ~ 13398443 (-) False LOC110529426
TU769234 other downstream 508270 13374939 ~ 13378281 (-) True LOC110529426
TU768544 other downstream 1189228 12615880 ~ 12697323 (-) True lpgat1
TU769793 other upstream 96875 13983626 ~ 13986108 (-) False G675834
TU769790 other upstream 97093 13983844 ~ 13986108 (-) True G675834
TU770045 other upstream 320236 14206987 ~ 14207625 (-) True G676077
TU770156 other upstream 401098 14287849 ~ 14288345 (-) True G676178
TU770677 other upstream 624839 14511590 ~ 14516528 (-) True G676635

Expression Profile