RNA id: TU769782



Basic Information


Item Value
RNA id TU769782
length 225
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G675826
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 13978488 ~ 13978712 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CTGCGAGTTTCCCTCCTAAGCATCACAAAGAAAAATAATTCGAAAAAGACTCAAAAACCCTTTACCCTTTGAACAAATGAAACAGGAGACACTTTCAGAAAAGGCCTTTTGATAGCTGACTACAAACCTAATCAACTTCTTGTGCAGTGTCTTTCCACCTTACAAGTCTTGACATGTCTGGTAAGGGCAGGAGGTAACATAAGATGGTTAGTGCTGTGTTTTAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU769766 lncRNA downstream 13756 13964506 ~ 13964732 (-) True G675810
TU769696 lncRNA downstream 91737 13886551 ~ 13886751 (-) True G675743
TU769695 lncRNA downstream 93024 13885254 ~ 13885464 (-) True G675742
TU769626 lncRNA downstream 150621 13827550 ~ 13827867 (-) True G675675
TU769621 lncRNA downstream 154063 13824155 ~ 13824425 (-) True G675670
TU769796 lncRNA upstream 10314 13989026 ~ 13989305 (-) True G675837
TU769800 lncRNA upstream 11695 13990407 ~ 13990640 (-) True G675841
TU769801 lncRNA upstream 12444 13991156 ~ 13991384 (-) True G675842
TU769836 lncRNA upstream 35241 14013953 ~ 14014194 (-) True G675877
TU769838 lncRNA upstream 36642 14015354 ~ 14015591 (-) True G675879
XM_021611606.2 mRNA downstream 345632 13626761 ~ 13632856 (-) True LOC110529435
XM_021611607.2 mRNA downstream 345633 13626761 ~ 13632855 (-) False LOC110529435
XM_021611605.2 mRNA downstream 376927 13598376 ~ 13601561 (-) True LOC110529434
XM_021611214.2 mRNA downstream 419737 13553115 ~ 13558751 (-) True hsp90ab1
NM_001124231.1 mRNA downstream 419832 13552248 ~ 13558656 (-) False hsp90ab1
XM_036984822.1 mRNA upstream 361788 14340500 ~ 14389518 (-) False LOC110529441
XM_036984821.1 mRNA upstream 361788 14340500 ~ 14392658 (-) False LOC110529441
XM_036984823.1 mRNA upstream 361788 14340500 ~ 14392658 (-) False LOC110529441
XM_036984824.1 mRNA upstream 361788 14340500 ~ 14392658 (-) False LOC110529441
XM_036984825.1 mRNA upstream 361788 14340500 ~ 14392658 (-) False LOC110529441
TU769337 other downstream 492351 13485679 ~ 13486137 (-) True G675415
TU769335 other downstream 493554 13484093 ~ 13484934 (-) True G675413
TU769232 other downstream 580045 13374939 ~ 13398443 (-) False LOC110529426
TU769234 other downstream 600207 13374939 ~ 13378281 (-) True LOC110529426
TU768544 other downstream 1281165 12615880 ~ 12697323 (-) True lpgat1
TU769793 other upstream 4914 13983626 ~ 13986108 (-) False G675834
TU769790 other upstream 5132 13983844 ~ 13986108 (-) True G675834
TU770045 other upstream 228275 14206987 ~ 14207625 (-) True G676077
TU770156 other upstream 309137 14287849 ~ 14288345 (-) True G676178
TU770677 other upstream 532878 14511590 ~ 14516528 (-) True G676635

Expression Profile