RNA id: TU769796



Basic Information


Item Value
RNA id TU769796
length 280
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G675837
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 13989026 ~ 13989305 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


acataagtattcagaccctttgctgtgaaaCTCGAAATTggactcaggtgcatcctgtttccattaatcatccttgagatgtttatacaacttgattggagcccacctgtggtaaattcaattgattggacatgatttggaaaggcacaaacctttctatataaggttccacagttgacagtgcatgtcagagcaaaaagcaagccacgaggttgaaggaattgtccgtatatacctccgggacaggattgtgttgaggcaaagatctggggaagggtac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU769782 lncRNA downstream 10314 13978488 ~ 13978712 (-) True G675826
TU769766 lncRNA downstream 24294 13964506 ~ 13964732 (-) True G675810
TU769696 lncRNA downstream 102275 13886551 ~ 13886751 (-) True G675743
TU769695 lncRNA downstream 103562 13885254 ~ 13885464 (-) True G675742
TU769626 lncRNA downstream 161159 13827550 ~ 13827867 (-) True G675675
TU769800 lncRNA upstream 1102 13990407 ~ 13990640 (-) True G675841
TU769801 lncRNA upstream 1851 13991156 ~ 13991384 (-) True G675842
TU769836 lncRNA upstream 24648 14013953 ~ 14014194 (-) True G675877
TU769838 lncRNA upstream 26049 14015354 ~ 14015591 (-) True G675879
TU769861 lncRNA upstream 46712 14036017 ~ 14036366 (-) True G675902
XM_021611606.2 mRNA downstream 356170 13626761 ~ 13632856 (-) True LOC110529435
XM_021611607.2 mRNA downstream 356171 13626761 ~ 13632855 (-) False LOC110529435
XM_021611605.2 mRNA downstream 387465 13598376 ~ 13601561 (-) True LOC110529434
XM_021611214.2 mRNA downstream 430275 13553115 ~ 13558751 (-) True hsp90ab1
NM_001124231.1 mRNA downstream 430370 13552248 ~ 13558656 (-) False hsp90ab1
XM_036984822.1 mRNA upstream 351195 14340500 ~ 14389518 (-) False LOC110529441
XM_036984821.1 mRNA upstream 351195 14340500 ~ 14392658 (-) False LOC110529441
XM_036984823.1 mRNA upstream 351195 14340500 ~ 14392658 (-) False LOC110529441
XM_036984824.1 mRNA upstream 351195 14340500 ~ 14392658 (-) False LOC110529441
XM_036984825.1 mRNA upstream 351195 14340500 ~ 14392658 (-) False LOC110529441
TU769793 other downstream 2918 13983626 ~ 13986108 (-) False G675834
TU769790 other downstream 2918 13983844 ~ 13986108 (-) True G675834
TU769337 other downstream 502889 13485679 ~ 13486137 (-) True G675415
TU769335 other downstream 504092 13484093 ~ 13484934 (-) True G675413
TU769232 other downstream 590583 13374939 ~ 13398443 (-) False LOC110529426
TU770045 other upstream 217682 14206987 ~ 14207625 (-) True G676077
TU770156 other upstream 298544 14287849 ~ 14288345 (-) True G676178
TU770677 other upstream 522285 14511590 ~ 14516528 (-) True G676635
TU773511 other upstream 2443316 16432621 ~ 16433014 (-) True G679087
TU773640 other upstream 2635785 16625090 ~ 16630259 (-) False G679210

Expression Profile