RNA id: TU769890



Basic Information


Item Value
RNA id TU769890
length 314
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G675931
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 14068903 ~ 14069216 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtatatgcatatgattagtatgtgtggatagaaaacactctgaagtttctaaaactggttaaatcacggctgtgactataacagagcgtgtgtttcatcgaaaagcgcaagaaaaactggtcactgaaagctgaaaaaagtatccatgcgccactttcatgtattgtttaaaggacaccaaatttaatatggacacggatgcaattcctacagcttccacacgatgtcgccaaaaacgtcattttcattgacaaaaatcctttgagacattaccaatagatccgtcattccatccagcctacaacaaacgattt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU769861 lncRNA downstream 32537 14036017 ~ 14036366 (-) True G675902
TU769838 lncRNA downstream 53312 14015354 ~ 14015591 (-) True G675879
TU769836 lncRNA downstream 54709 14013953 ~ 14014194 (-) True G675877
TU769801 lncRNA downstream 77519 13991156 ~ 13991384 (-) True G675842
TU769800 lncRNA downstream 78263 13990407 ~ 13990640 (-) True G675841
TU769894 lncRNA upstream 3736 14072952 ~ 14073299 (-) True G675935
TU769895 lncRNA upstream 4468 14073684 ~ 14073910 (-) True G675936
TU769940 lncRNA upstream 37451 14106667 ~ 14106954 (-) True G675977
TU769943 lncRNA upstream 39857 14109073 ~ 14109564 (-) True G675980
TU769955 lncRNA upstream 49613 14118829 ~ 14119038 (-) True G675992
XM_021611606.2 mRNA downstream 436047 13626761 ~ 13632856 (-) True LOC110529435
XM_021611607.2 mRNA downstream 436048 13626761 ~ 13632855 (-) False LOC110529435
XM_021611605.2 mRNA downstream 467342 13598376 ~ 13601561 (-) True LOC110529434
XM_021611214.2 mRNA downstream 510152 13553115 ~ 13558751 (-) True hsp90ab1
NM_001124231.1 mRNA downstream 510247 13552248 ~ 13558656 (-) False hsp90ab1
XM_036984822.1 mRNA upstream 271284 14340500 ~ 14389518 (-) False LOC110529441
XM_036984821.1 mRNA upstream 271284 14340500 ~ 14392658 (-) False LOC110529441
XM_036984823.1 mRNA upstream 271284 14340500 ~ 14392658 (-) False LOC110529441
XM_036984824.1 mRNA upstream 271284 14340500 ~ 14392658 (-) False LOC110529441
XM_036984825.1 mRNA upstream 271284 14340500 ~ 14392658 (-) False LOC110529441
TU769793 other downstream 82795 13983626 ~ 13986108 (-) False G675834
TU769790 other downstream 82795 13983844 ~ 13986108 (-) True G675834
TU769337 other downstream 582766 13485679 ~ 13486137 (-) True G675415
TU769335 other downstream 583969 13484093 ~ 13484934 (-) True G675413
TU769234 other downstream 690622 13374939 ~ 13378281 (-) True LOC110529426
TU770045 other upstream 137771 14206987 ~ 14207625 (-) True G676077
TU770156 other upstream 218633 14287849 ~ 14288345 (-) True G676178
TU770677 other upstream 442374 14511590 ~ 14516528 (-) True G676635
TU773511 other upstream 2363405 16432621 ~ 16433014 (-) True G679087
TU773640 other upstream 2555874 16625090 ~ 16630259 (-) False G679210

Expression Profile