RNA id: TU769940



Basic Information


Item Value
RNA id TU769940
length 288
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G675977
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 14106667 ~ 14106954 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TATAAACACTGCCCTGTAAATACCAGCtatgctaatgaggtaacattataAACAGTGCCCTGTAAATACCGGCtatgctaatgaggtaacattataAACAGTGCCCTAGAAATACCGCCTATGCTAATGAGGTGACATTATAAACACTGCCCTATAAATACCGGCtatgctaatgaggtaacattataAACACTGCCCTATAAATACCGGCtatgctaatgaggtaacattataAACACTGCCCTATAAATACCGGCtatgctaatgaggtaacatTGTTAACACTGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU769895 lncRNA downstream 32757 14073684 ~ 14073910 (-) True G675936
TU769894 lncRNA downstream 33368 14072952 ~ 14073299 (-) True G675935
TU769890 lncRNA downstream 37451 14068903 ~ 14069216 (-) True G675931
TU769861 lncRNA downstream 70301 14036017 ~ 14036366 (-) True G675902
TU769838 lncRNA downstream 91076 14015354 ~ 14015591 (-) True G675879
TU769943 lncRNA upstream 2119 14109073 ~ 14109564 (-) True G675980
TU769955 lncRNA upstream 11875 14118829 ~ 14119038 (-) True G675992
TU769973 lncRNA upstream 31800 14138754 ~ 14139005 (-) True G676008
TU769975 lncRNA upstream 32570 14139524 ~ 14139821 (-) True G676009
TU769996 lncRNA upstream 55361 14162315 ~ 14162628 (-) True G676030
XM_021611606.2 mRNA downstream 473811 13626761 ~ 13632856 (-) True LOC110529435
XM_021611607.2 mRNA downstream 473812 13626761 ~ 13632855 (-) False LOC110529435
XM_021611605.2 mRNA downstream 505106 13598376 ~ 13601561 (-) True LOC110529434
XM_021611214.2 mRNA downstream 547916 13553115 ~ 13558751 (-) True hsp90ab1
NM_001124231.1 mRNA downstream 548011 13552248 ~ 13558656 (-) False hsp90ab1
XM_036984822.1 mRNA upstream 233546 14340500 ~ 14389518 (-) False LOC110529441
XM_036984821.1 mRNA upstream 233546 14340500 ~ 14392658 (-) False LOC110529441
XM_036984823.1 mRNA upstream 233546 14340500 ~ 14392658 (-) False LOC110529441
XM_036984824.1 mRNA upstream 233546 14340500 ~ 14392658 (-) False LOC110529441
XM_036984825.1 mRNA upstream 233546 14340500 ~ 14392658 (-) False LOC110529441
TU769793 other downstream 120559 13983626 ~ 13986108 (-) False G675834
TU769790 other downstream 120559 13983844 ~ 13986108 (-) True G675834
TU769337 other downstream 620530 13485679 ~ 13486137 (-) True G675415
TU769335 other downstream 621733 13484093 ~ 13484934 (-) True G675413
TU769234 other downstream 728386 13374939 ~ 13378281 (-) True LOC110529426
TU770045 other upstream 100033 14206987 ~ 14207625 (-) True G676077
TU770156 other upstream 180895 14287849 ~ 14288345 (-) True G676178
TU770677 other upstream 404636 14511590 ~ 14516528 (-) True G676635
TU773511 other upstream 2325667 16432621 ~ 16433014 (-) True G679087
TU773640 other upstream 2518136 16625090 ~ 16630259 (-) False G679210

Expression Profile