RNA id: TU770693



Basic Information


Item Value
RNA id TU770693
length 253
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G676648
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 14532700 ~ 14532952 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ccttcatacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtggctaggggaaaaactccctagaaaggccgaagcctggttcctctctaggttatgtggggtggccagtcctcttctggctgtgccgggtggagattataacagaacatggccaagatgttcaaatgttcataaatgaccagcatggtccaatagtaataaggc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU770691 lncRNA downstream 449 14529486 ~ 14532251 (-) True G676646
TU770690 lncRNA downstream 3246 14529228 ~ 14529454 (-) True G676645
TU770680 lncRNA downstream 22272 14508329 ~ 14510428 (-) False G676635
TU770667 lncRNA downstream 46041 14486150 ~ 14486659 (-) True G676629
TU770575 lncRNA downstream 192647 14338632 ~ 14340053 (-) True G676544
TU770694 lncRNA upstream 261 14533213 ~ 14533441 (-) True G676649
TU770737 lncRNA upstream 69563 14602515 ~ 14602782 (-) True G676691
TU770747 lncRNA upstream 82733 14615685 ~ 14746960 (-) False G676696
TU770758 lncRNA upstream 100241 14633193 ~ 14635877 (-) True G676705
TU770775 lncRNA upstream 144002 14676954 ~ 14684085 (-) True G676717
XM_036984827.1 mRNA downstream 61571 14396011 ~ 14471129 (-) False LOC110529444
XR_005052780.1 mRNA downstream 61571 14396011 ~ 14471129 (-) True LOC110529444
XM_036984824.1 mRNA downstream 140042 14340500 ~ 14392658 (-) False LOC110529441
XM_021611617.2 mRNA upstream 16729 14549681 ~ 14573557 (-) False LOC110529446
XM_021611616.2 mRNA upstream 16729 14549681 ~ 14573584 (-) True LOC110529446
XM_036984837.1 mRNA upstream 190820 14723772 ~ 14748492 (-) False LOC110529453
XM_036984841.1 mRNA upstream 190820 14723772 ~ 14748569 (-) False LOC110529453
XM_036984840.1 mRNA upstream 191942 14724894 ~ 14748492 (-) True LOC110529453
TU770677 other downstream 16172 14511590 ~ 14516528 (-) True G676635
TU770156 other downstream 244355 14287849 ~ 14288345 (-) True G676178
TU770045 other downstream 325075 14206987 ~ 14207625 (-) True G676077
TU769793 other downstream 546592 13983626 ~ 13986108 (-) False G675834
TU773511 other upstream 1899669 16432621 ~ 16433014 (-) True G679087
TU773640 other upstream 2092138 16625090 ~ 16630259 (-) False G679210
TU773642 other upstream 2092138 16625090 ~ 16630259 (-) True G679210
TU773944 other upstream 2580591 17113543 ~ 17114528 (-) True G679471
TU776244 other upstream 4258278 18791230 ~ 18792137 (-) True G681659

Expression Profile