RNA id: TU770694



Basic Information


Item Value
RNA id TU770694
length 229
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G676649
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 14533213 ~ 14533441 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


agtacatccaactggcctcacaactgcagaccacgtatagcattgtgtgggcgagtggtttgctgttgtgaaaagagtgccccatggtggggttatggtatgggcaggcataagctacggactacaaacacaattgcattttggctatttgaatgcacagaaataccgtgacgatatcctgaggtccattgtgaggcccatctgtgaccaacagatgcacatctgtatt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU770693 lncRNA downstream 261 14532700 ~ 14532952 (-) True G676648
TU770691 lncRNA downstream 962 14529486 ~ 14532251 (-) True G676646
TU770690 lncRNA downstream 3759 14529228 ~ 14529454 (-) True G676645
TU770680 lncRNA downstream 22785 14508329 ~ 14510428 (-) False G676635
TU770667 lncRNA downstream 46554 14486150 ~ 14486659 (-) True G676629
TU770737 lncRNA upstream 69074 14602515 ~ 14602782 (-) True G676691
TU770747 lncRNA upstream 82244 14615685 ~ 14746960 (-) False G676696
TU770758 lncRNA upstream 99752 14633193 ~ 14635877 (-) True G676705
TU770775 lncRNA upstream 143513 14676954 ~ 14684085 (-) True G676717
TU770784 lncRNA upstream 160425 14693866 ~ 14695835 (-) True G676722
XM_036984827.1 mRNA downstream 62084 14396011 ~ 14471129 (-) False LOC110529444
XR_005052780.1 mRNA downstream 62084 14396011 ~ 14471129 (-) True LOC110529444
XM_036984824.1 mRNA downstream 140555 14340500 ~ 14392658 (-) False LOC110529441
XM_021611617.2 mRNA upstream 16240 14549681 ~ 14573557 (-) False LOC110529446
XM_021611616.2 mRNA upstream 16240 14549681 ~ 14573584 (-) True LOC110529446
XM_036984837.1 mRNA upstream 190331 14723772 ~ 14748492 (-) False LOC110529453
XM_036984841.1 mRNA upstream 190331 14723772 ~ 14748569 (-) False LOC110529453
XM_036984840.1 mRNA upstream 191453 14724894 ~ 14748492 (-) True LOC110529453
TU770677 other downstream 16685 14511590 ~ 14516528 (-) True G676635
TU770156 other downstream 244868 14287849 ~ 14288345 (-) True G676178
TU770045 other downstream 325588 14206987 ~ 14207625 (-) True G676077
TU769793 other downstream 547105 13983626 ~ 13986108 (-) False G675834
TU773511 other upstream 1899180 16432621 ~ 16433014 (-) True G679087
TU773640 other upstream 2091649 16625090 ~ 16630259 (-) False G679210
TU773642 other upstream 2091649 16625090 ~ 16630259 (-) True G679210
TU773944 other upstream 2580102 17113543 ~ 17114528 (-) True G679471
TU776244 other upstream 4257789 18791230 ~ 18792137 (-) True G681659

Expression Profile