RNA id: TU770825



Basic Information


Item Value
RNA id TU770825
length 219
lncRNA type intronic
GC content 0.45
exon number 2
gene id G676753
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 14725676 ~ 14725935 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TCGGGGTGTAACTTCTCACTTCTCAGGCAATCCTATCACCCTCCAGCTAAATATATCCATATTTTAATTCACCTGTCGGTAATCTGATGAATGCTGATGTGTATTATCCCCCTGCAGTCTGTGGATCCTCTCCCTGCAGTGGTcTCAAGCAGAATAATCATAGTCTTCCTGCTAGTTCCTTATTTGCATACAGCCTTGCTTGAAACGGGCAGCTGTGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU770746 lncRNA downstream 18852 14698388 ~ 14706824 (-) True G676696
TU770784 lncRNA downstream 29841 14693866 ~ 14695835 (-) True G676722
TU770775 lncRNA downstream 41591 14676954 ~ 14684085 (-) True G676717
TU770758 lncRNA downstream 89799 14633193 ~ 14635877 (-) True G676705
TU770737 lncRNA downstream 122894 14602515 ~ 14602782 (-) True G676691
TU770846 lncRNA upstream 48091 14774026 ~ 14774552 (-) True G676771
TU770899 lncRNA upstream 158427 14884362 ~ 14887465 (-) True G676822
TU771282 lncRNA upstream 307325 15033260 ~ 15033545 (-) True G677114
TU771287 lncRNA upstream 308054 15033989 ~ 15038853 (-) True si:ch73-111k22.3
TU771290 lncRNA upstream 313268 15039203 ~ 15039434 (-) True G677117
XM_021611616.2 mRNA downstream 152092 14549681 ~ 14573584 (-) True LOC110529446
XM_021611617.2 mRNA downstream 152119 14549681 ~ 14573557 (-) False LOC110529446
XM_036984827.1 mRNA downstream 254547 14396011 ~ 14471129 (-) False LOC110529444
XR_005052780.1 mRNA downstream 254547 14396011 ~ 14471129 (-) True LOC110529444
XM_036984826.1 mRNA downstream 338164 14342529 ~ 14387512 (-) True LOC110529441
XM_021611627.2 mRNA upstream 30056 14755991 ~ 14850442 (-) False LOC110529452
XM_036984834.1 mRNA upstream 30056 14755991 ~ 14850442 (-) False LOC110529452
XM_021611625.2 mRNA upstream 30060 14755995 ~ 14850442 (-) False LOC110529452
XM_036984836.1 mRNA upstream 30060 14755995 ~ 14850442 (-) False LOC110529452
XM_036984835.1 mRNA upstream 30060 14755995 ~ 14850443 (-) True LOC110529452
TU770677 other downstream 209148 14511590 ~ 14516528 (-) True G676635
TU770156 other downstream 437331 14287849 ~ 14288345 (-) True G676178
TU770045 other downstream 518051 14206987 ~ 14207625 (-) True G676077
TU769793 other downstream 739568 13983626 ~ 13986108 (-) False G675834
TU773511 other upstream 1706686 16432621 ~ 16433014 (-) True G679087
TU773640 other upstream 1899155 16625090 ~ 16630259 (-) False G679210
TU773642 other upstream 1899155 16625090 ~ 16630259 (-) True G679210
TU773944 other upstream 2387608 17113543 ~ 17114528 (-) True G679471
TU776244 other upstream 4065295 18791230 ~ 18792137 (-) True G681659

Expression Profile