RNA id: TU774615



Basic Information


Item Value
RNA id TU774615
length 305
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G680121
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 17584050 ~ 17584354 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gatatagcccctggttcactcaagacctgactgccctcgaccagcacaaaaacatcctgtggcggactgcaatagcattgaatagtccacgcgttatgcaactgttcagggaagtcaggaaccaaaacacgcagtcagtcaggaaagcaaaggccagctttttcaaacagaaatttgcatcctgtagctctaactccaaaaagttttgggacactgtaaagtccatggagaacaagagcacttCCTCcgagctgcccactgcactgaggctaggtaacacggtcaccaccgataaatccatgata

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU774539 lncRNA downstream 54111 17529690 ~ 17529939 (-) True G680046
TU774506 lncRNA downstream 74616 17509166 ~ 17509434 (-) True G680015
TU774186 lncRNA downstream 281114 17302588 ~ 17302936 (-) True G679703
TU774164 lncRNA downstream 304107 17279713 ~ 17279943 (-) True G679681
TU774162 lncRNA downstream 304696 17279144 ~ 17279354 (-) True G679679
TU774617 lncRNA upstream 856 17585210 ~ 17585501 (-) True G680123
TU775085 lncRNA upstream 114439 17698793 ~ 17699180 (-) True G680573
TU775083 lncRNA upstream 117460 17701814 ~ 17702255 (-) True G680571
TU775084 lncRNA upstream 118661 17703015 ~ 17703245 (-) True G680572
TU775094 lncRNA upstream 126190 17710544 ~ 17715714 (-) True G680581
XM_036984907.1 mRNA downstream 85066 17422766 ~ 17498984 (-) False LOC110529510
XM_021611756.2 mRNA upstream 122255 17706609 ~ 17720195 (-) True LOC110529512
XM_021611757.2 mRNA upstream 136613 17720967 ~ 17723873 (-) True LOC110529513
XM_021611758.2 mRNA upstream 143936 17728290 ~ 17756041 (-) True LOC110529514
XM_021611761.2 mRNA upstream 171899 17756253 ~ 17835551 (-) True LOC110529517
XM_021611765.2 mRNA upstream 484798 18069152 ~ 18072594 (-) True LOC110529520
TU773944 other downstream 469522 17113543 ~ 17114528 (-) True G679471
TU773640 other downstream 953791 16625090 ~ 16630259 (-) False G679210
TU773642 other downstream 953791 16625090 ~ 16630259 (-) True G679210
TU773511 other downstream 1151036 16432621 ~ 16433014 (-) True G679087
TU770677 other downstream 3067522 14511590 ~ 14516528 (-) True G676635
TU776244 other upstream 1206876 18791230 ~ 18792137 (-) True G681659
TU779858 other upstream 3894412 21478766 ~ 21479203 (-) True G684844
TU780899 other upstream 4336073 21920427 ~ 21924908 (-) False LOC110529207
TU780900 other upstream 4336073 21920427 ~ 21924908 (-) True LOC110529207
TU781111 other upstream 4574676 22159030 ~ 22161042 (-) False G685953

Expression Profile