RNA id: TU775085



Basic Information


Item Value
RNA id TU775085
length 279
lncRNA type antisense_over
GC content 0.50
exon number 2
gene id G680573
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 17698793 ~ 17699180 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GATAGAGCTGGGATTCTCTGCTGACATCATGAGTTCAGCTGCCATGAAATTCACCAGGATGTTGGTAACGTCTGTGCACACTGTCTTCAGGACGTACTTGGCAATGTGGACCTGGGTCTCATCAGAGAAGAGCTTGGTCCCTTTCTCAAAGAGCCTGATGTTGTTGTACAGGTTGGAGAGCTCCTCCTGGAAGTCTTTCACACTTCTCTTCTTTGTCACCCCAGTCGTGGAGCTAGTGGAAGACATGAACACAGTCCGAACCACCTCCTGGTAGGTCTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU774617 lncRNA downstream 113292 17585210 ~ 17585501 (-) True G680123
TU774615 lncRNA downstream 114439 17584050 ~ 17584354 (-) True G680121
TU774539 lncRNA downstream 168854 17529690 ~ 17529939 (-) True G680046
TU774506 lncRNA downstream 189359 17509166 ~ 17509434 (-) True G680015
TU774186 lncRNA downstream 395857 17302588 ~ 17302936 (-) True G679703
TU775083 lncRNA upstream 2634 17701814 ~ 17702255 (-) True G680571
TU775084 lncRNA upstream 3835 17703015 ~ 17703245 (-) True G680572
TU775094 lncRNA upstream 11364 17710544 ~ 17715714 (-) True G680581
TU775095 lncRNA upstream 13553 17712733 ~ 17717551 (-) True G680582
TU775100 lncRNA upstream 32403 17731583 ~ 17731795 (-) True G680586
XM_036984907.1 mRNA downstream 199809 17422766 ~ 17498984 (-) False LOC110529510
XM_021611756.2 mRNA upstream 7429 17706609 ~ 17720195 (-) True LOC110529512
XM_021611757.2 mRNA upstream 21787 17720967 ~ 17723873 (-) True LOC110529513
XM_021611758.2 mRNA upstream 29110 17728290 ~ 17756041 (-) True LOC110529514
XM_021611761.2 mRNA upstream 57073 17756253 ~ 17835551 (-) True LOC110529517
XM_021611765.2 mRNA upstream 369972 18069152 ~ 18072594 (-) True LOC110529520
TU773944 other downstream 584265 17113543 ~ 17114528 (-) True G679471
TU773640 other downstream 1068534 16625090 ~ 16630259 (-) False G679210
TU773642 other downstream 1068534 16625090 ~ 16630259 (-) True G679210
TU773511 other downstream 1265779 16432621 ~ 16433014 (-) True G679087
TU770677 other downstream 3182265 14511590 ~ 14516528 (-) True G676635
TU776244 other upstream 1092050 18791230 ~ 18792137 (-) True G681659
TU779858 other upstream 3779586 21478766 ~ 21479203 (-) True G684844
TU780899 other upstream 4221247 21920427 ~ 21924908 (-) False LOC110529207
TU780900 other upstream 4221247 21920427 ~ 21924908 (-) True LOC110529207
TU781111 other upstream 4459850 22159030 ~ 22161042 (-) False G685953

Expression Profile