RNA id: TU775084



Basic Information


Item Value
RNA id TU775084
length 231
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G680572
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 17703015 ~ 17703245 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ATATTACACTAATAAAAAGTGTAGAAACGTTTGTGAAGGTTTGGTATGGCTTTAGCTACTGCAGGCCTATGATATGAAGGCAGTGTGCCACAGCGCTACAACTGACTTTGACAGTTTAACTTGAGGAACTTCAGGCCTAccagagttactcctataatctAAGAATATGCTTCTCTTTATACAAAATATTCAGACCAAAAAGGTACAAATTACCTGTGTCGTAGCATGCCA

Function


GO: NA

KEGG:

id description

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU775083 lncRNA downstream 760 17701814 ~ 17702255 (-) True G680571
TU775085 lncRNA downstream 3835 17698793 ~ 17699180 (-) True G680573
TU774617 lncRNA downstream 117514 17585210 ~ 17585501 (-) True G680123
TU774615 lncRNA downstream 118661 17584050 ~ 17584354 (-) True G680121
TU774539 lncRNA downstream 173076 17529690 ~ 17529939 (-) True G680046
TU775094 lncRNA upstream 7299 17710544 ~ 17715714 (-) True G680581
TU775095 lncRNA upstream 9488 17712733 ~ 17717551 (-) True G680582
TU775100 lncRNA upstream 28338 17731583 ~ 17731795 (-) True G680586
TU775106 lncRNA upstream 42080 17745325 ~ 17745528 (-) True G680592
TU775172 lncRNA upstream 132595 17835840 ~ 17836420 (-) True G680654
XM_036984907.1 mRNA downstream 204031 17422766 ~ 17498984 (-) False LOC110529510
XM_021611756.2 mRNA upstream 3364 17706609 ~ 17720195 (-) True LOC110529512
XM_021611757.2 mRNA upstream 17722 17720967 ~ 17723873 (-) True LOC110529513
XM_021611758.2 mRNA upstream 25045 17728290 ~ 17756041 (-) True LOC110529514
XM_021611761.2 mRNA upstream 53008 17756253 ~ 17835551 (-) True LOC110529517
XM_021611765.2 mRNA upstream 365907 18069152 ~ 18072594 (-) True LOC110529520
TU773944 other downstream 588487 17113543 ~ 17114528 (-) True G679471
TU773640 other downstream 1072756 16625090 ~ 16630259 (-) False G679210
TU773642 other downstream 1072756 16625090 ~ 16630259 (-) True G679210
TU773511 other downstream 1270001 16432621 ~ 16433014 (-) True G679087
TU770677 other downstream 3186487 14511590 ~ 14516528 (-) True G676635
TU776244 other upstream 1087985 18791230 ~ 18792137 (-) True G681659
TU779858 other upstream 3775521 21478766 ~ 21479203 (-) True G684844
TU780899 other upstream 4217182 21920427 ~ 21924908 (-) False LOC110529207
TU780900 other upstream 4217182 21920427 ~ 21924908 (-) True LOC110529207
TU781111 other upstream 4455785 22159030 ~ 22161042 (-) False G685953

Expression Profile