RNA id: TU775106



Basic Information


Item Value
RNA id TU775106
length 204
lncRNA type intronic
GC content 0.36
exon number 1
gene id G680592
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 17745325 ~ 17745528 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ATTTTATAGGAGACGTAAAAAGCCcatttgaagcatttatttataAGGAAGGGATAGGCTCCATCTGTTGGAAATAAAGGAAGACATATCTGTCCAAAGCATAAAACCTCTTAAGACCTCTATGAGAAAGTTAATCTCAGCATATAGCTACTGTGTACGCTATAGTCTTATCATCAGAAGGGATATTGTATGGGCTCTATCCAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU775100 lncRNA downstream 13530 17731583 ~ 17731795 (-) True G680586
TU775095 lncRNA downstream 27774 17712733 ~ 17717551 (-) True G680582
TU775094 lncRNA downstream 29611 17710544 ~ 17715714 (-) True G680581
TU775084 lncRNA downstream 42080 17703015 ~ 17703245 (-) True G680572
TU775083 lncRNA downstream 43070 17701814 ~ 17702255 (-) True G680571
TU775172 lncRNA upstream 90312 17835840 ~ 17836420 (-) True G680654
TU775382 lncRNA upstream 400820 18146348 ~ 18146565 (-) True G680859
TU775407 lncRNA upstream 421721 18167249 ~ 18167464 (-) True G680882
TU775409 lncRNA upstream 423221 18168749 ~ 18169039 (-) True G680884
TU775417 lncRNA upstream 432975 18178503 ~ 18178731 (-) True G680892
XM_021611757.2 mRNA downstream 21452 17720967 ~ 17723873 (-) True LOC110529513
XM_021611756.2 mRNA downstream 25130 17706609 ~ 17720195 (-) True LOC110529512
XM_036984909.1 mRNA downstream 246341 17422766 ~ 17498984 (-) False LOC110529510
XM_021611761.2 mRNA upstream 10725 17756253 ~ 17835551 (-) True LOC110529517
XM_021611765.2 mRNA upstream 323624 18069152 ~ 18072594 (-) True LOC110529520
XM_021611774.2 mRNA upstream 836635 18582163 ~ 18587994 (-) False LOC110529526
XM_021611776.2 mRNA upstream 836635 18582163 ~ 18587994 (-) False LOC110529526
XM_021611775.2 mRNA upstream 837376 18582904 ~ 18587994 (-) True LOC110529526
TU773944 other downstream 630797 17113543 ~ 17114528 (-) True G679471
TU773640 other downstream 1115066 16625090 ~ 16630259 (-) False G679210
TU773642 other downstream 1115066 16625090 ~ 16630259 (-) True G679210
TU773511 other downstream 1312311 16432621 ~ 16433014 (-) True G679087
TU770677 other downstream 3228797 14511590 ~ 14516528 (-) True G676635
TU776244 other upstream 1045702 18791230 ~ 18792137 (-) True G681659
TU779858 other upstream 3733238 21478766 ~ 21479203 (-) True G684844
TU780899 other upstream 4174899 21920427 ~ 21924908 (-) False LOC110529207
TU780900 other upstream 4174899 21920427 ~ 21924908 (-) True LOC110529207
TU781111 other upstream 4413502 22159030 ~ 22161042 (-) False G685953

Expression Profile