RNA id: TU783348



Basic Information


Item Value
RNA id TU783348
length 206
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G687936
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 23667631 ~ 23667836 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gaagatgaaacgtggctgggtctttcagcatgacaatgatcccaaacacaccacccgggcaacaaaggagtggcttcgtaagaagcatttcaaggtcctggagtggcctagccagtctccagatctcaaccccatagaaaatctttggagggagttgaaagtccgtgttgcccagcaacagcaccAAAACGTCACTGCtccagagg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU783346 lncRNA downstream 1454 23665961 ~ 23666177 (-) True G687934
TU783344 lncRNA downstream 3122 23664237 ~ 23664509 (-) True G687932
TU783343 lncRNA downstream 4007 23663360 ~ 23663624 (-) True G687931
TU783332 lncRNA downstream 37839 23623145 ~ 23629792 (-) False G687921
TU783333 lncRNA downstream 37839 23623145 ~ 23629792 (-) True G687921
TU783352 lncRNA upstream 18007 23685843 ~ 23731426 (-) True G687940
TU783357 lncRNA upstream 25004 23692840 ~ 23728805 (-) True G687945
TU783376 lncRNA upstream 68224 23736060 ~ 23736363 (-) True G687964
TU783378 lncRNA upstream 69870 23737706 ~ 23737906 (-) True G687966
TU783381 lncRNA upstream 75484 23743320 ~ 23743743 (-) True G687969
XM_036985066.1 mRNA downstream 8520 23614938 ~ 23659111 (-) False LOC110529643
XM_036985068.1 mRNA downstream 8521 23614938 ~ 23659110 (-) False LOC110529643
XM_036985064.1 mRNA downstream 16548 23614938 ~ 23651083 (-) False LOC110529643
XM_036985065.1 mRNA downstream 16548 23614938 ~ 23651083 (-) False LOC110529643
XM_021612026.2 mRNA downstream 45687 23614938 ~ 23621944 (-) False LOC110529643
XM_036985070.1 mRNA upstream 10995 23678831 ~ 23682110 (-) False LOC110529644
XM_036985071.1 mRNA upstream 10995 23678831 ~ 23682110 (-) False LOC110529644
XM_036985078.1 mRNA upstream 10995 23678831 ~ 23682843 (-) False LOC110529644
XM_036985075.1 mRNA upstream 10995 23678831 ~ 23682846 (-) False LOC110529644
XM_036985072.1 mRNA upstream 10995 23678831 ~ 23682852 (-) False LOC110529644
TU783300 other downstream 30223 23635309 ~ 23637408 (-) True G687890
TU783285 other downstream 46385 23616907 ~ 23621246 (-) True LOC110529643
TU781111 other downstream 1506589 22159030 ~ 22161042 (-) False G685953
TU780899 other downstream 1742723 21920427 ~ 21924908 (-) False LOC110529207
TU783403 other upstream 86996 23754832 ~ 23756910 (-) True G687979
TU783552 other upstream 320263 23988099 ~ 23988854 (-) True G688109
TU783833 other upstream 757227 24425063 ~ 24425553 (-) False G688366
TU783834 other upstream 757227 24425063 ~ 24425553 (-) True G688366
TU783821 other upstream 771129 24438965 ~ 24440200 (-) True LOC110529658

Expression Profile