RNA id: TU785861



Basic Information


Item Value
RNA id TU785861
length 255
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G690219
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 26035519 ~ 26035773 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CCTATGAACTATTTGACATGTCTATATGAGTCATTTTTAGTCTTCCGAGAAAATGTCATTACCTTTAAATGCATTATCTGATCCTAGGACTCTCTCAGTTGGTTTATGGTTTCATGTTCAAAGGATGAAGAGGTTTGAGGAAGAATTACTTTAGTTATATCTTCCTTCTGTTCCTTTGCAGATAATTATACCTAACACTGGTCTATCCAGTTCCACTGAAACTGATATAGTAAACAGATGTGGAACTGTTATTTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU785724 lncRNA downstream 12735 26022582 ~ 26022784 (-) True G690115
TU785721 lncRNA downstream 15271 26020049 ~ 26020248 (-) True G690112
TU785704 lncRNA downstream 28174 26007121 ~ 26007345 (-) True G690096
TU785701 lncRNA downstream 34969 26000259 ~ 26000550 (-) True G690093
TU785684 lncRNA downstream 42642 25992487 ~ 25992877 (-) True LOC110529697
TU785873 lncRNA upstream 27101 26062874 ~ 26063101 (-) True G690231
TU785884 lncRNA upstream 37097 26072870 ~ 26073142 (-) True G690237
TU785932 lncRNA upstream 126841 26162614 ~ 26166381 (-) True G690280
TU786395 lncRNA upstream 203989 26239762 ~ 26240225 (-) True G690691
TU786396 lncRNA upstream 204858 26240631 ~ 26240834 (-) True G690692
LOC110529219 mRNA downstream 17737 26006882 ~ 26017782 (-) True LOC110529219
XR_005052847.1 mRNA downstream 36834 25992424 ~ 25998685 (-) False LOC110529697
XR_002474428.2 mRNA downstream 38453 25992424 ~ 25997066 (-) False LOC110529697
XM_036985175.1 mRNA downstream 161842 25854580 ~ 25873677 (-) True LOC110529696
XM_036985176.1 mRNA downstream 161863 25854580 ~ 25873656 (-) False LOC110529696
XM_036985177.1 mRNA upstream 51673 26087446 ~ 26094609 (-) True LOC110529220
XM_021612146.2 mRNA upstream 59168 26094941 ~ 26106801 (-) True LOC110529700
XM_036986843.1 mRNA upstream 84692 26120465 ~ 26122280 (-) True LOC110531082
XM_021612155.2 mRNA upstream 136673 26172446 ~ 26175639 (-) True LOC110529703
XM_021612161.2 mRNA upstream 386722 26422495 ~ 26426074 (-) True LOC110529708
TU785681 other downstream 44376 25990678 ~ 25991143 (-) True G690073
TU785641 other downstream 70026 25965179 ~ 25965493 (-) True G690033
TU785453 other downstream 230044 25801964 ~ 25805475 (-) False LOC110529694
TU785454 other downstream 230044 25802030 ~ 25805475 (-) True LOC110529694
TU785403 other downstream 370854 25664165 ~ 25664665 (-) True G689810
TU786474 other upstream 393342 26429115 ~ 26430843 (-) True cenpw
TU787231 other upstream 828437 26864210 ~ 26868078 (-) True G691447
TU787547 other upstream 1279795 27315568 ~ 27315935 (-) True G691747
TU788741 other upstream 2079963 28115736 ~ 28116048 (-) True G692859
TU789000 other upstream 2443044 28478817 ~ 28481898 (-) True si:dkey-85n7.8

Expression Profile