RNA id: TU785884



Basic Information


Item Value
RNA id TU785884
length 273
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G690237
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 26072870 ~ 26073142 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TGAAAGGGAATGAAACACTTCCCCTTTGTGGACGGTTGGAGACTCATAAGAGAAATCCATAGCTCGTAGTTAGTAAAATGATGGATGGATTAGCCAGATTTTGGCATCATCAACTTTTAGAAAGTTAGTAGGAAAGTTAATCATTTGAACCACCTAAATATACTCACATTCACTGAACTCAAACATTCATTTCCCTACTGCTTTTTCTATAATCCTACAGGCTTTATCATTCTCCATACCTTATATTCCAATGCATTCAACTTTATGCAGGCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU785873 lncRNA downstream 9769 26062874 ~ 26063101 (-) True G690231
TU785861 lncRNA downstream 37097 26035519 ~ 26035773 (-) True G690219
TU785724 lncRNA downstream 50086 26022582 ~ 26022784 (-) True G690115
TU785721 lncRNA downstream 52622 26020049 ~ 26020248 (-) True G690112
TU785704 lncRNA downstream 65525 26007121 ~ 26007345 (-) True G690096
TU785932 lncRNA upstream 89472 26162614 ~ 26166381 (-) True G690280
TU786395 lncRNA upstream 166620 26239762 ~ 26240225 (-) True G690691
TU786396 lncRNA upstream 167489 26240631 ~ 26240834 (-) True G690692
TU786397 lncRNA upstream 168781 26241923 ~ 26242172 (-) True G690693
TU786408 lncRNA upstream 171368 26244510 ~ 26244983 (-) False G690697
LOC110529219 mRNA downstream 55088 26006882 ~ 26017782 (-) True LOC110529219
XR_005052847.1 mRNA downstream 74185 25992424 ~ 25998685 (-) False LOC110529697
XR_002474428.2 mRNA downstream 75804 25992424 ~ 25997066 (-) False LOC110529697
XM_036985175.1 mRNA downstream 199193 25854580 ~ 25873677 (-) True LOC110529696
XM_036985176.1 mRNA downstream 199214 25854580 ~ 25873656 (-) False LOC110529696
XM_036985177.1 mRNA upstream 14304 26087446 ~ 26094609 (-) True LOC110529220
XM_021612146.2 mRNA upstream 21799 26094941 ~ 26106801 (-) True LOC110529700
XM_036986843.1 mRNA upstream 47323 26120465 ~ 26122280 (-) True LOC110531082
XM_021612155.2 mRNA upstream 99304 26172446 ~ 26175639 (-) True LOC110529703
XM_021612161.2 mRNA upstream 349353 26422495 ~ 26426074 (-) True LOC110529708
TU785681 other downstream 81727 25990678 ~ 25991143 (-) True G690073
TU785641 other downstream 107377 25965179 ~ 25965493 (-) True G690033
TU785453 other downstream 267395 25801964 ~ 25805475 (-) False LOC110529694
TU785454 other downstream 267395 25802030 ~ 25805475 (-) True LOC110529694
TU785403 other downstream 408205 25664165 ~ 25664665 (-) True G689810
TU786474 other upstream 355973 26429115 ~ 26430843 (-) True cenpw
TU787231 other upstream 791068 26864210 ~ 26868078 (-) True G691447
TU787547 other upstream 1242426 27315568 ~ 27315935 (-) True G691747
TU788741 other upstream 2042594 28115736 ~ 28116048 (-) True G692859
TU789000 other upstream 2405675 28478817 ~ 28481898 (-) True si:dkey-85n7.8

Expression Profile