RNA id: TU786397


Basic Information

Item Value
RNA id TU786397
length 250
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G690693
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 26241923 ~ 26242172 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gtgtgtttgaggtgaTTGTGTGTATGCATATCTCGGTTTGTGTGTAAGGggtaaggggtgtgtgtgtgtgtgtgtgtgagagagtgtgcatgcgtgcatgtgggTTTCATGTCTGTAGGCATGTGAATGTATGTATGAATGTGATTGTACTTGACAGAGCATGTAATATGAATAGTAGTCTTTATCCCTATGTGTATACAAGTGTGTGGGTGTATCTTGACATTTCCATGTGTTCCTTAAACTGAGTGAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU786396 lncRNA downstream 1089 26240631 ~ 26240834 (-) True G690692
TU786395 lncRNA downstream 1698 26239762 ~ 26240225 (-) True G690691
TU785932 lncRNA downstream 75542 26162614 ~ 26166381 (-) True G690280
TU785884 lncRNA downstream 168781 26072870 ~ 26073142 (-) True G690237
TU785873 lncRNA downstream 178822 26062874 ~ 26063101 (-) True G690231
TU786408 lncRNA upstream 2338 26244510 ~ 26244983 (-) False G690697
TU786409 lncRNA upstream 2338 26244510 ~ 26244921 (-) True G690697
TU786405 lncRNA upstream 4155 26246327 ~ 26247958 (-) False G690696
TU786407 lncRNA upstream 4155 26246327 ~ 26246801 (-) False G690696
TU786403 lncRNA upstream 4185 26246357 ~ 26250741 (-) False G690696
XM_021612155.2 mRNA downstream 66284 26172446 ~ 26175639 (-) True LOC110529703
XM_036986843.1 mRNA downstream 119643 26120465 ~ 26122280 (-) True LOC110531082
XM_021612146.2 mRNA downstream 135122 26094941 ~ 26106801 (-) True LOC110529700
XM_036985177.1 mRNA downstream 147314 26087446 ~ 26094609 (-) True LOC110529220
LOC110529219 mRNA downstream 224141 26006882 ~ 26017782 (-) True LOC110529219
XM_021612161.2 mRNA upstream 180323 26422495 ~ 26426074 (-) True LOC110529708
XM_021612162.2 mRNA upstream 186868 26429040 ~ 26430888 (-) False cenpw
XM_021612163.2 mRNA upstream 201945 26444117 ~ 26463156 (-) False LOC110529710
XM_021612164.2 mRNA upstream 201945 26444117 ~ 26463156 (-) False LOC110529710
XM_021612167.2 mRNA upstream 201945 26444117 ~ 26463156 (-) False LOC110529710
TU785681 other downstream 250780 25990678 ~ 25991143 (-) True G690073
TU785641 other downstream 276430 25965179 ~ 25965493 (-) True G690033
TU785453 other downstream 436448 25801964 ~ 25805475 (-) False LOC110529694
TU785454 other downstream 436448 25802030 ~ 25805475 (-) True LOC110529694
TU785403 other downstream 577258 25664165 ~ 25664665 (-) True G689810
TU786474 other upstream 186943 26429115 ~ 26430843 (-) True cenpw
TU787231 other upstream 622038 26864210 ~ 26868078 (-) True G691447
TU787547 other upstream 1073396 27315568 ~ 27315935 (-) True G691747
TU788741 other upstream 1873564 28115736 ~ 28116048 (-) True G692859
TU789000 other upstream 2236645 28478817 ~ 28481898 (-) True si:dkey-85n7.8

Expression Profile