RNA id: TU792632



Basic Information


Item Value
RNA id TU792632
length 275
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G696366
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 31354830 ~ 31355104 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gctataacatctgctaaaccgtGTATGATTTGTCTATGGACAAAGAATGATTGCAATCCACACTTTGGTTTTGATAAACTAACCACTAACTTTTAGCAACATTAGCATTGTGCCAACAATTCCTGAAATCGGTAAACTATCACTTATAGTTATGTCGGCTCAGGAATGATGTTCTTACTAGTGGTTGTCTGTTCCTTGTTATTATCATAAGACGTGCAACGTTCTGTGAGCTGTCCAATCAAACTGATATGAACATGAAGAGTCCCTGTCAATAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU792631 lncRNA downstream 298 31354199 ~ 31354532 (-) True G696365
TU792625 lncRNA downstream 3492 31350742 ~ 31351338 (-) True G696359
TU792624 lncRNA downstream 4966 31349597 ~ 31349864 (-) True G696358
TU792622 lncRNA downstream 6504 31348095 ~ 31348326 (-) True G696356
TU792619 lncRNA downstream 8528 31345960 ~ 31346302 (-) True G696353
TU792633 lncRNA upstream 4864 31359968 ~ 31360217 (-) True G696367
TU792635 lncRNA upstream 6937 31362041 ~ 31362314 (-) True G696369
TU792645 lncRNA upstream 42636 31397740 ~ 31402556 (-) True G696378
TU792811 lncRNA upstream 195408 31550512 ~ 31551280 (-) True G696531
TU792825 lncRNA upstream 217165 31572269 ~ 31574519 (-) True G696543
XM_036985285.1 mRNA downstream 56309 31292803 ~ 31298521 (-) True zfp36l1b
XM_021612304.2 mRNA downstream 138065 31209003 ~ 31216765 (-) False LOC110529778
XM_021611348.2 mRNA downstream 234330 31099526 ~ 31120500 (-) False LOC110529227
LOC118965648 mRNA downstream 238083 31116578 ~ 31116747 (-) True LOC118965648
trnaa-ugc-25 mRNA downstream 284413 31070343 ~ 31070417 (-) True trnaa-ugc-25
XM_021612318.2 mRNA upstream 21488 31376592 ~ 31381078 (-) True cgrrf1
XM_021612321.2 mRNA upstream 73420 31428524 ~ 31431727 (-) True LOC110529787
LOC110529789 mRNA upstream 77288 31432392 ~ 31435370 (-) True LOC110529789
XM_021612322.2 mRNA upstream 98230 31453334 ~ 31458247 (-) True LOC110529790
XM_021612323.2 mRNA upstream 131713 31486817 ~ 31503990 (-) True LOC110529791
TU792310 other downstream 499423 30855107 ~ 30855407 (-) True G696073
TU792305 other downstream 507621 30846902 ~ 30847209 (-) True G696068
TU790962 other downstream 1292662 30001763 ~ 30062168 (-) False G694858
TU790963 other downstream 1292662 30038588 ~ 30062168 (-) True G694858
TU789639 other downstream 2395998 28958395 ~ 28958832 (-) True G693665
TU792778 other upstream 122250 31477354 ~ 31478027 (-) True G696499
TU792983 other upstream 302622 31657726 ~ 31679735 (-) True LOC110529793
TU793919 other upstream 859382 32214486 ~ 32217549 (-) False LOC110529804
TU793920 other upstream 859382 32214486 ~ 32217549 (-) True LOC110529804
TU794118 other upstream 1143695 32498799 ~ 32499410 (-) True G697774

Expression Profile