RNA id: TU798740



Basic Information


Item Value
RNA id TU798740
length 201
lncRNA type intronic
GC content 0.44
exon number 1
gene id G702026
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 36027256 ~ 36027456 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTATATTGGGAAAGATTATGTTCTATCCCATTTCTTTCCCAAAAGATAAGCTTCAATTTCAGTGGGAGGAACTGATCAGGGCACATTAATAATTGTAAGGCGAAAGAAACGCACatctgtttaggcgaggtgctggctagaggagtagaacacctgtttaggtgaggtgctggctagaggagtagaacacctgtttaggcg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU798734 lncRNA downstream 7152 36019893 ~ 36020104 (-) True G702020
TU798731 lncRNA downstream 11066 36015875 ~ 36016190 (-) True G702017
TU798728 lncRNA downstream 17400 36009492 ~ 36009856 (-) True G702014
TU798725 lncRNA downstream 20327 36004243 ~ 36006929 (-) True G702011
TU798678 lncRNA downstream 70527 35932334 ~ 35956729 (-) True G701966
TU798753 lncRNA upstream 24058 36051514 ~ 36051821 (-) True G702039
TU798775 lncRNA upstream 73893 36101349 ~ 36102190 (-) True G702056
TU798872 lncRNA upstream 196976 36224432 ~ 36224789 (-) True G702145
TU798889 lncRNA upstream 201719 36229175 ~ 36233884 (-) True G702149
TU798901 lncRNA upstream 231912 36259368 ~ 36259824 (-) True G702161
XM_036985399.1 mRNA downstream 106350 35916240 ~ 35920906 (-) False LOC110529868
XM_036985400.1 mRNA downstream 106350 35916240 ~ 35920906 (-) True LOC110529868
XM_036985398.1 mRNA downstream 108037 35916240 ~ 35919219 (-) False LOC110529868
XM_036985396.1 mRNA downstream 120555 35901652 ~ 35906701 (-) True LOC118936680
XM_036985397.1 mRNA downstream 120557 35901652 ~ 35906699 (-) False LOC118936680
XM_036985404.1 mRNA upstream 25480 36052936 ~ 36058362 (-) False LOC110529870
XM_036985403.1 mRNA upstream 25480 36052936 ~ 36059371 (-) True LOC110529870
XM_036985411.1 mRNA upstream 36081 36063537 ~ 36129888 (-) False LOC110529235
XM_036985405.1 mRNA upstream 36081 36063537 ~ 36206480 (-) False LOC110529235
XM_036985406.1 mRNA upstream 36081 36063537 ~ 36206480 (-) False LOC110529235
TU798300 other downstream 109081 35900623 ~ 35918175 (-) True G701618
TU798297 other downstream 122984 35900623 ~ 35904272 (-) False G701618
TU798046 other downstream 321943 35641355 ~ 35705313 (-) True LOC110529865
TU798044 other downstream 339620 35641355 ~ 35687636 (-) False LOC110529865
TU800348 other upstream 1327640 37355096 ~ 37361593 (-) True LOC110529880
TU800488 other upstream 1461771 37489227 ~ 37492157 (-) True LOC110530908
TU801610 other upstream 2010269 38037725 ~ 38038346 (-) True G704702
TU801790 other upstream 2286033 38313489 ~ 38313803 (-) True G704874
TU803684 other upstream 3192188 39219644 ~ 39226313 (-) True G706683

Expression Profile