RNA id: TCONS_00035632


Basic Information

Item Value
RNA id TCONS_00035632
length 1171
RNA type mRNA
GC content 0.41
exon number 6
gene id XLOC_018084
representative True

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 25515259 ~ 25522911 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GGAGCTGCTTTTGACCCAACAATCCTATTATACAATGCTGTTTCCAATATAATCTGTCAAATGGTGTTTGGCCAGAGATTTGACTATGCTGACCACCAGTTCAAaacaatgttaaaatatatttctaaaagcATTCAACTAGAAGGATCCGTTTGGGGACAGaTCTATGAAGCATTTCCAGCCATTATGAAGCATCTTCCAGGGCCTCACAATGATATTTTCAGTAACTATGACTTACTGAAGAGCTTCGTACATGAGGTCATTGTAAAACACAAGGCTAAACTGGATCCCTCAGAGCCTCGTGACTACATCGATACCTTCCTAATCGAGATGAAGGAGAAACCCCATGAAAGAGTAAACGGCTTTGAGGAACCAAACCTTGTTGCATGTGTTCTTGACCTGTTTCTGGCCGGAACTGAATCCACATCCAATACATTATGTTGGGGGCTCATATACCTCATAATGTATCCAGACGTACAAGAAAAGGTCCAGGAGGAGATCGACAGAGTGATTGGAAACTCAAGAGAGCCAAGTATAGCCGACAAACCCAACATGCCCTACACAGAGGCTGTCATCCATGAGATCATGAGATTTGGAGATGTTATACCATTGAATGGATTGCGAGTGGCTGCAAGAGACACAACCCTTGGAGAATGCTTCATCCCAAAGGGCACAACCGTTTTACCTATACTGCACTCTGTTCTCTTTGATGAAAACGAATGGGAGACACCCTACAAGTTCAATCCTGGCCACTTTTTAGACAAAGAGGGCAAGTTTGTAAGGCGAGATGCATTTATGCCCTTTTCTGCAGGAAAGAGGGTCTGTTTGGGGGAGCAGATCGCCAGAATTGAACTCTTCctattttttgtcagtttgttCCGCAAATTCAGATTTTCAGCCACAGAGGGAGAGAAACTCAACATGGATGGAGTGATTGGAATAACACGCACTCCACACCCGTTCAAGATCTGTGCAACAGCACGTTGAGACAAATCTGACTATTTTTATTAGGAATTAATGAACAATATTTATAGTCAATTACAGTACATTATATGTATCTAACATGACACTACTGgcaatttttatttcacattttgggCTTTTTGACTTCataaattgtttttcttttcctggctttattgaaaataaacacctaaaaaagtgTTTCTTT

Function

GO:

id name namespace
GO:0042738 exogenous drug catabolic process biological_process
GO:0006082 organic acid metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0006805 xenobiotic metabolic process biological_process
GO:0043231 intracellular membrane-bounded organelle cellular_component
GO:0005737 cytoplasm cellular_component
GO:0008395 steroid hydroxylase activity molecular_function
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen molecular_function
GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen molecular_function
GO:0004497 monooxygenase activity molecular_function
GO:0005506 iron ion binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0020037 heme binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041001-158 Predicted to enable heme binding activity; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen; and steroid hydroxylase activity. Predicted to be involved in exogenous drug catabolic process; organic acid metabolic process; and xenobiotic metabolic process. Predicted to be active in cytoplasm and intracellular membrane-bounded organelle. Is expressed in intestinal bulb and liver. Human ortholog(s) of this gene implicated in hypertension; myocardial infarction; pulmonary hypertension; renal fibrosis; and renal hypertension. Orthologous to human CYP2J2 (cytochrome P450 family 2 subfamily J member 2).

Ensembl:

ensembl_id ENSDART00000186993

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00036840 lncRNA downstream 103079 25401086 ~ 25412181 (-) True XLOC_018081
TCONS_00036839 lncRNA downstream 203806 25307795 ~ 25311454 (-) True XLOC_018080
TCONS_00036476 lncRNA downstream 782951 24729131 ~ 24732309 (-) True XLOC_018078
TCONS_00036838 lncRNA downstream 1060331 24448007 ~ 24454929 (-) False XLOC_018077
TCONS_00035638 lncRNA upstream 29937 25548425 ~ 25551676 (-) False XLOC_018087
TCONS_00035640 lncRNA upstream 81617 25600105 ~ 25605285 (-) True XLOC_018088
TCONS_00036841 lncRNA upstream 147561 25666049 ~ 25669922 (-) False XLOC_018091
TCONS_00035653 lncRNA upstream 192303 25710791 ~ 25712415 (-) True XLOC_018092
TCONS_00036842 lncRNA upstream 544057 26062545 ~ 26070949 (-) True XLOC_018101
TCONS_00035630 mRNA downstream 28876 25473056 ~ 25486384 (-) True XLOC_018083
TCONS_00035629 mRNA downstream 33954 25473056 ~ 25481306 (-) False XLOC_018083
TCONS_00035628 mRNA downstream 70014 25440514 ~ 25445246 (-) True XLOC_018082
TCONS_00035627 mRNA downstream 70023 25440514 ~ 25445237 (-) False XLOC_018082
TCONS_00035625 mRNA downstream 103079 25359108 ~ 25412181 (-) False XLOC_018081
TCONS_00035633 mRNA upstream 7314 25525802 ~ 25533739 (-) True XLOC_018085
TCONS_00035634 mRNA upstream 16181 25534669 ~ 25542183 (-) False XLOC_018086
TCONS_00035637 mRNA upstream 29937 25548425 ~ 25551676 (-) False XLOC_018087
TCONS_00035641 mRNA upstream 99626 25618114 ~ 25626198 (-) False XLOC_018089
TCONS_00035642 mRNA upstream 99626 25618114 ~ 25626428 (-) False XLOC_018089
TCONS_00035626 other downstream 145380 25368510 ~ 25369880 (-) False XLOC_018081
TCONS_00035616 other downstream 1343120 24152799 ~ 24172140 (-) False XLOC_018073
TCONS_00035611 other downstream 1392503 24083139 ~ 24122757 (-) True XLOC_018072
TCONS_00035595 other downstream 2089606 23423846 ~ 23425654 (-) True XLOC_018063
TCONS_00035593 other downstream 2266621 23245639 ~ 23248639 (-) True XLOC_018062
TCONS_00035635 other upstream 19092 25537580 ~ 25538417 (-) False XLOC_018086
TCONS_00035636 other upstream 19867 25538355 ~ 25540754 (-) True XLOC_018086
TCONS_00035639 other upstream 30937 25549425 ~ 25550816 (-) True XLOC_018087
TCONS_00035648 other upstream 124192 25642680 ~ 25644837 (-) True XLOC_018090
TCONS_00035651 other upstream 147561 25666049 ~ 25709349 (-) False XLOC_018091

Expression Profile

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