Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU804249 |
| length | 720 |
| lncRNA type | intronic |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G707234 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 40102600 ~ 40104160 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
40,099,200
40,099,600
40,100,000
40,100,400
40,100,800
40,101,200
40,101,600
40,102,000
40,102,400
40,102,800
40,103,200
40,103,600
40,104,000
40,104,400
40,104,800
40,105,200
40,105,600
40,106,000
NC_048572.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU804179 | lncRNA | downstream | 77964 | 40024389 ~ 40024636 (-) | True | G707168 |
| TU804140 | lncRNA | downstream | 180604 | 39920496 ~ 39921996 (-) | True | G707129 |
| TU804151 | lncRNA | downstream | 194912 | 39907405 ~ 39907688 (-) | True | G707140 |
| TU804148 | lncRNA | downstream | 199499 | 39902621 ~ 39903101 (-) | True | G707137 |
| TU804141 | lncRNA | downstream | 207789 | 39894479 ~ 39894811 (-) | True | G707130 |
| TU804332 | lncRNA | upstream | 160377 | 40264537 ~ 40269554 (-) | True | G707316 |
| TU804379 | lncRNA | upstream | 236286 | 40340446 ~ 40340669 (-) | True | G707362 |
| TU804383 | lncRNA | upstream | 242686 | 40346846 ~ 40347214 (-) | True | G707366 |
| TU804391 | lncRNA | upstream | 253189 | 40357349 ~ 40357567 (-) | True | G707374 |
| TU804430 | lncRNA | upstream | 319994 | 40424154 ~ 40424902 (-) | True | G707408 |
| XM_036985462.1 | mRNA | downstream | 85433 | 39959369 ~ 40017167 (-) | False | slc22a16 |
| XR_002474630.2 | mRNA | downstream | 1049201 | 39050749 ~ 39053399 (-) | True | LOC110531091 |
| XR_005052874.1 | mRNA | downstream | 1278555 | 38822142 ~ 38824045 (-) | False | LOC118965515 |
| LOC110530913 | mRNA | downstream | 1300648 | 38787513 ~ 38801952 (-) | True | LOC110530913 |
| trnal-uaa-3 | mRNA | downstream | 1662320 | 38440198 ~ 38440280 (-) | True | trnal-uaa-3 |
| XM_036986869.1 | mRNA | upstream | 28031 | 40132191 ~ 40164976 (-) | True | LOC110530919 |
| XM_036985463.1 | mRNA | upstream | 39751 | 40143911 ~ 40145193 (-) | False | LOC118965516 |
| XM_036985464.1 | mRNA | upstream | 40072 | 40144232 ~ 40145193 (-) | True | LOC118965516 |
| XM_021612562.2 | mRNA | upstream | 534111 | 40638271 ~ 40668799 (-) | False | armc2 |
| XM_036985472.1 | mRNA | upstream | 534111 | 40638271 ~ 40668799 (-) | False | armc2 |
| TU804129 | other | downstream | 142987 | 39956961 ~ 39959613 (-) | True | slc22a16 |
| TU803684 | other | downstream | 876287 | 39219644 ~ 39226313 (-) | True | G706683 |
| TU801790 | other | downstream | 1788797 | 38313489 ~ 38313803 (-) | True | G704874 |
| TU801610 | other | downstream | 2064254 | 38037725 ~ 38038346 (-) | True | G704702 |
| TU800488 | other | downstream | 2610443 | 37489227 ~ 37492157 (-) | True | LOC110530908 |
| TU806574 | other | upstream | 2615611 | 42719771 ~ 42720699 (-) | True | G709272 |
| TU806781 | other | upstream | 3066600 | 43170760 ~ 43171082 (-) | True | G709454 |
| TU808567 | other | upstream | 4434633 | 44538793 ~ 44539504 (-) | True | G711133 |
| TU810338 | other | upstream | 5353617 | 45457777 ~ 45458248 (-) | True | G712814 |
| TU811283 | other | upstream | 6206970 | 46311130 ~ 46325681 (-) | True | crfb16 |
