Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU807028 |
| length | 518 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G709662 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 43369730 ~ 43372842 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
43,366,000
43,367,000
43,368,000
43,369,000
43,370,000
43,371,000
43,372,000
43,373,000
43,374,000
43,375,000
43,376,000
NC_048572.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU806981 | lncRNA | downstream | 721 | 43353370 ~ 43369009 (-) | False | G709639 |
| TU806984 | lncRNA | downstream | 721 | 43358156 ~ 43369009 (-) | False | G709639 |
| TU806992 | lncRNA | downstream | 3960 | 43365159 ~ 43365770 (-) | False | G709639 |
| TU807020 | lncRNA | downstream | 7253 | 43356568 ~ 43362477 (-) | False | G709657 |
| TU807021 | lncRNA | downstream | 7253 | 43356568 ~ 43362477 (-) | True | G709657 |
| TU807029 | lncRNA | upstream | 2105 | 43374947 ~ 43377664 (-) | True | G709663 |
| TU807033 | lncRNA | upstream | 7717 | 43380559 ~ 43381176 (-) | True | G709667 |
| TU807209 | lncRNA | upstream | 147583 | 43520425 ~ 43520797 (-) | True | G709835 |
| TU807894 | lncRNA | upstream | 214842 | 43587684 ~ 43588262 (-) | True | G710488 |
| TU807896 | lncRNA | upstream | 216813 | 43589655 ~ 43589884 (-) | True | G710490 |
| XM_021612583.2 | mRNA | downstream | 843144 | 42431791 ~ 42526586 (-) | True | puf60a |
| XM_021612585.2 | mRNA | downstream | 843203 | 42431791 ~ 42526527 (-) | False | puf60a |
| XM_021612584.2 | mRNA | downstream | 844061 | 42431791 ~ 42525669 (-) | False | puf60a |
| XM_036985478.1 | mRNA | downstream | 949643 | 42340682 ~ 42420087 (-) | False | klhl18 |
| XM_021612591.2 | mRNA | upstream | 226912 | 43599754 ~ 43602305 (-) | False | mycb |
| XM_021612593.2 | mRNA | upstream | 226912 | 43599754 ~ 43602305 (-) | True | mycb |
| XR_005053023.1 | mRNA | upstream | 386487 | 43759329 ~ 43763318 (-) | True | LOC118965613 |
| XM_021612600.2 | mRNA | upstream | 812151 | 44184993 ~ 44436559 (-) | False | efr3a |
| XM_021612601.2 | mRNA | upstream | 812151 | 44184993 ~ 44436559 (-) | False | efr3a |
| TU806781 | other | downstream | 198648 | 43170760 ~ 43171082 (-) | True | G709454 |
| TU806574 | other | downstream | 649031 | 42719771 ~ 42720699 (-) | True | G709272 |
| TU804129 | other | downstream | 3410117 | 39956961 ~ 39959613 (-) | True | slc22a16 |
| TU803684 | other | downstream | 4143417 | 39219644 ~ 39226313 (-) | True | G706683 |
| TU801790 | other | downstream | 5055927 | 38313489 ~ 38313803 (-) | True | G704874 |
| TU808567 | other | upstream | 1165951 | 44538793 ~ 44539504 (-) | True | G711133 |
| TU810338 | other | upstream | 2084935 | 45457777 ~ 45458248 (-) | True | G712814 |
| TU811283 | other | upstream | 2938288 | 46311130 ~ 46325681 (-) | True | crfb16 |
| TU811888 | other | upstream | 3678625 | 47051467 ~ 47057660 (-) | True | LOC110529973 |
| TU812043 | other | upstream | 3805582 | 47178424 ~ 47178736 (-) | True | G714425 |
