Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU808215 |
| length | 441 |
| lncRNA type | inter_gene |
| GC content | 0.32 |
| exon number | 1 |
| gene id | G710796 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 44071616 ~ 44072056 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
44,070,400
44,070,800
44,071,200
44,071,600
44,072,000
44,072,400
44,072,800
44,073,200
44,073,600
44,074,000
44,074,400
44,074,800
44,075,200
NC_048572.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU808212 | lncRNA | downstream | 370 | 44070693 ~ 44071246 (-) | True | G710793 |
| TU808214 | lncRNA | downstream | 2415 | 44068863 ~ 44069201 (-) | True | G710795 |
| TU808219 | lncRNA | downstream | 3422 | 44067939 ~ 44068194 (-) | True | G710800 |
| TU808202 | lncRNA | downstream | 15264 | 44053030 ~ 44056352 (-) | True | G710785 |
| TU808198 | lncRNA | downstream | 27657 | 44043646 ~ 44043959 (-) | True | G710781 |
| TU808228 | lncRNA | upstream | 2702 | 44074758 ~ 44075236 (-) | True | G710809 |
| TU808236 | lncRNA | upstream | 14117 | 44086173 ~ 44086410 (-) | True | G710817 |
| TU808238 | lncRNA | upstream | 15605 | 44087661 ~ 44087861 (-) | True | G710819 |
| TU808239 | lncRNA | upstream | 16307 | 44088363 ~ 44088689 (-) | True | G710820 |
| TU808241 | lncRNA | upstream | 21959 | 44094015 ~ 44095958 (-) | True | G710822 |
| XR_005053023.1 | mRNA | downstream | 308298 | 43759329 ~ 43763318 (-) | True | LOC118965613 |
| XM_021612591.2 | mRNA | downstream | 469311 | 43599754 ~ 43602305 (-) | False | mycb |
| XM_021612593.2 | mRNA | downstream | 469311 | 43599754 ~ 43602305 (-) | True | mycb |
| XM_021612583.2 | mRNA | downstream | 1545030 | 42431791 ~ 42526586 (-) | True | puf60a |
| XM_021612585.2 | mRNA | downstream | 1545089 | 42431791 ~ 42526527 (-) | False | puf60a |
| XM_021612600.2 | mRNA | upstream | 112937 | 44184993 ~ 44436559 (-) | False | efr3a |
| XM_021612601.2 | mRNA | upstream | 112937 | 44184993 ~ 44436559 (-) | False | efr3a |
| XM_021612602.2 | mRNA | upstream | 112937 | 44184993 ~ 44436559 (-) | True | efr3a |
| XR_002474453.2 | mRNA | upstream | 318822 | 44390878 ~ 44394639 (-) | True | LOC110529930 |
| XR_002474328.2 | mRNA | upstream | 908913 | 44980969 ~ 44984268 (-) | True | LOC110529115 |
| TU806781 | other | downstream | 900534 | 43170760 ~ 43171082 (-) | True | G709454 |
| TU806574 | other | downstream | 1350917 | 42719771 ~ 42720699 (-) | True | G709272 |
| TU804129 | other | downstream | 4112003 | 39956961 ~ 39959613 (-) | True | slc22a16 |
| TU803684 | other | downstream | 4845303 | 39219644 ~ 39226313 (-) | True | G706683 |
| TU801790 | other | downstream | 5757813 | 38313489 ~ 38313803 (-) | True | G704874 |
| TU808567 | other | upstream | 466737 | 44538793 ~ 44539504 (-) | True | G711133 |
| TU810338 | other | upstream | 1385721 | 45457777 ~ 45458248 (-) | True | G712814 |
| TU811283 | other | upstream | 2239074 | 46311130 ~ 46325681 (-) | True | crfb16 |
| TU811888 | other | upstream | 2979411 | 47051467 ~ 47057660 (-) | True | LOC110529973 |
| TU812043 | other | upstream | 3106368 | 47178424 ~ 47178736 (-) | True | G714425 |
