RNA id: TU810691



Basic Information


Item Value
RNA id TU810691
length 277
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G713141
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 45990943 ~ 45991219 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gggtatgtctctatcagttttgcacatcgagagactgacattttttcccattcctccttgcaagacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggaaatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU810663 lncRNA downstream 35869 45954871 ~ 45955074 (-) True G713114
TU810619 lncRNA downstream 46553 45905185 ~ 45944390 (-) True G713072
TU810595 lncRNA downstream 99229 45863486 ~ 45891714 (-) True G713049
TU810554 lncRNA downstream 205879 45784786 ~ 45785064 (-) True G713011
TU810545 lncRNA downstream 218564 45772129 ~ 45772379 (-) True G713002
TU810692 lncRNA upstream 596 45991815 ~ 45992105 (-) True G713142
TU810700 lncRNA upstream 10940 46002159 ~ 46002461 (-) True G713150
TU810714 lncRNA upstream 46027 46037246 ~ 46037460 (-) True G713164
TU810753 lncRNA upstream 125457 46116676 ~ 46119814 (-) True G713201
TU810755 lncRNA upstream 128835 46120054 ~ 46120821 (-) True G713203
XM_036985492.1 mRNA downstream 66213 45793248 ~ 45924730 (-) False amph
XM_021612631.2 mRNA upstream 15192 46006411 ~ 46033000 (-) True tmem71
XM_021612634.2 mRNA upstream 70524 46061743 ~ 46074046 (-) False ift57
XM_036985498.1 mRNA upstream 71262 46062481 ~ 46074020 (-) True ift57
XM_021612635.2 mRNA upstream 131525 46122744 ~ 46133988 (-) True cavin4a
XM_021612636.2 mRNA upstream 172434 46163653 ~ 46241435 (-) False tmeff1a
TU810338 other downstream 532695 45457777 ~ 45458248 (-) True G712814
TU808567 other downstream 1451439 44538793 ~ 44539504 (-) True G711133
TU806781 other downstream 2819861 43170760 ~ 43171082 (-) True G709454
TU806574 other downstream 3270244 42719771 ~ 42720699 (-) True G709272
TU804129 other downstream 6031330 39956961 ~ 39959613 (-) True slc22a16
TU811283 other upstream 319911 46311130 ~ 46325681 (-) True crfb16
TU811888 other upstream 1060248 47051467 ~ 47057660 (-) True LOC110529973
TU812043 other upstream 1187205 47178424 ~ 47178736 (-) True G714425
TU813564 other upstream 2297723 48288942 ~ 48289581 (-) True G715865
TU813956 other upstream 2551072 48542291 ~ 48616523 (-) True dlg1l

Expression Profile