RNA id: TU811074


Basic Information

Item Value
RNA id TU811074
length 339
lncRNA type inter_gene
GC content 0.55
exon number 1
gene id G713504
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 46624969 ~ 46625307 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gcccagcatcgtccgggttagggagggcttggccggtagggatatccttgactcatcgcgcaccagcgactcctgtggcgggccgggcgcagtgcacgctaaccaaggttgccaggtgcacgctgtttcctctgacacattggtgcggctggcttccgggttggatgtgcgctgtgtaaagaggcagtgcggctaggttgggttgtgtatcggaggacgcatgactttcaaccttcgtctctcccaagccagtacgggagttgtagcgatgagacaagatagtagctactaaacaattggataccacaaaatcggggagaaaaaggggtaaaaaaaatc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU811072 lncRNA upstream 1308 46623456 ~ 46623661 (+) True G713502
TU811055 lncRNA upstream 34917 46589716 ~ 46590052 (+) True G713491
TU811044 lncRNA upstream 46923 46577696 ~ 46578046 (+) True G713481
TU811020 lncRNA upstream 59742 46543486 ~ 46565227 (+) True G713457
TU810976 lncRNA upstream 140513 46484229 ~ 46484456 (+) True G713418
TU811078 lncRNA downstream 2606 46627913 ~ 46628125 (+) True G713508
TU811082 lncRNA downstream 9797 46635104 ~ 46635328 (+) True G713512
TU811083 lncRNA downstream 10322 46635629 ~ 46636061 (+) True G713513
TU811084 lncRNA downstream 10848 46636155 ~ 46655418 (+) True G713514
TU811188 lncRNA downstream 155510 46780817 ~ 46848749 (+) True G713610
XM_021612658.2 mRNA upstream 5803 46594403 ~ 46619166 (+) False mfn1a
XM_021612659.2 mRNA upstream 5803 46594403 ~ 46619166 (+) False mfn1a
XM_021612660.2 mRNA upstream 5803 46594403 ~ 46619166 (+) False mfn1a
XM_036985503.1 mRNA upstream 5803 46594403 ~ 46619166 (+) True mfn1a
XM_036985504.1 mRNA upstream 10488 46594403 ~ 46614481 (+) False mfn1a
XR_005052882.1 mRNA downstream 78952 46704259 ~ 46714142 (+) True LOC118965520
XM_021612665.2 mRNA downstream 237254 46862561 ~ 46898724 (+) False phb2a
XM_021612666.2 mRNA downstream 237254 46862561 ~ 46898724 (+) False phb2a
XM_036985509.1 mRNA downstream 237500 46862807 ~ 46898724 (+) True phb2a
XM_021612667.2 mRNA downstream 290838 46916145 ~ 46931901 (+) True LOC110529968
TU810963 other upstream 158742 46465398 ~ 46466227 (+) True G713405
TU809392 other upstream 830420 45793269 ~ 45794549 (+) True G711912
TU809309 other upstream 977592 45646857 ~ 45647377 (+) True G711845
TU808451 other upstream 2175996 44448584 ~ 44448973 (+) True G711021
TU806817 other upstream 3427327 43196560 ~ 43197642 (+) True G709490
TU811150 other downstream 90608 46715915 ~ 46769246 (+) True G713574
TU813740 other downstream 1912436 48537743 ~ 48544164 (+) True G716035
TU813841 other downstream 2135036 48760343 ~ 48760740 (+) True G716133
TU814604 other downstream 2707534 49332841 ~ 49333772 (+) True G716862
TU814748 other downstream 2920905 49546212 ~ 49547085 (+) True G716993

Expression Profile