RNA id: TU811082



Basic Information


Item Value
RNA id TU811082
length 225
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G713512
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 46635104 ~ 46635328 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ttgttaacaacactgtcatctcagattttcaaaatatgcgttacagccaacgctagacaagcatttgtgtaagtttatcatggcataatgctatgctaggctctgctggcagcaggcaacattttcacgaaaataagaaaagcaaccaaattaaatcatttacctttgaagaacttcagatgctttcactcaggagactcccagttagatagcaaatgttccttt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU811078 lncRNA upstream 6979 46627913 ~ 46628125 (+) True G713508
TU811074 lncRNA upstream 9797 46624969 ~ 46625307 (+) True G713504
TU811072 lncRNA upstream 11443 46623456 ~ 46623661 (+) True G713502
TU811055 lncRNA upstream 45052 46589716 ~ 46590052 (+) True G713491
TU811044 lncRNA upstream 57058 46577696 ~ 46578046 (+) True G713481
TU811083 lncRNA downstream 301 46635629 ~ 46636061 (+) True G713513
TU811084 lncRNA downstream 827 46636155 ~ 46655418 (+) True G713514
TU811188 lncRNA downstream 145489 46780817 ~ 46848749 (+) True G713610
TU811633 lncRNA downstream 223942 46859270 ~ 46859590 (+) True G714030
TU811666 lncRNA downstream 272102 46907430 ~ 46907812 (+) True G714062
XM_021612658.2 mRNA upstream 15938 46594403 ~ 46619166 (+) False mfn1a
XM_021612659.2 mRNA upstream 15938 46594403 ~ 46619166 (+) False mfn1a
XM_021612660.2 mRNA upstream 15938 46594403 ~ 46619166 (+) False mfn1a
XM_036985503.1 mRNA upstream 15938 46594403 ~ 46619166 (+) True mfn1a
XM_036985504.1 mRNA upstream 20623 46594403 ~ 46614481 (+) False mfn1a
XR_005052882.1 mRNA downstream 68931 46704259 ~ 46714142 (+) True LOC118965520
XM_021612665.2 mRNA downstream 227233 46862561 ~ 46898724 (+) False phb2a
XM_021612666.2 mRNA downstream 227233 46862561 ~ 46898724 (+) False phb2a
XM_036985509.1 mRNA downstream 227479 46862807 ~ 46898724 (+) True phb2a
XM_021612667.2 mRNA downstream 280817 46916145 ~ 46931901 (+) True LOC110529968
TU810963 other upstream 168877 46465398 ~ 46466227 (+) True G713405
TU809392 other upstream 840555 45793269 ~ 45794549 (+) True G711912
TU809309 other upstream 987727 45646857 ~ 45647377 (+) True G711845
TU808451 other upstream 2186131 44448584 ~ 44448973 (+) True G711021
TU806817 other upstream 3437462 43196560 ~ 43197642 (+) True G709490
TU811150 other downstream 80587 46715915 ~ 46769246 (+) True G713574
TU813740 other downstream 1902415 48537743 ~ 48544164 (+) True G716035
TU813841 other downstream 2125015 48760343 ~ 48760740 (+) True G716133
TU814604 other downstream 2697513 49332841 ~ 49333772 (+) True G716862
TU814748 other downstream 2910884 49546212 ~ 49547085 (+) True G716993

Expression Profile