RNA id: TU811912



Basic Information


Item Value
RNA id TU811912
length 207
lncRNA type inter_gene
GC content 0.57
exon number 1
gene id G714298
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 47077761 ~ 47077967 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ggttAAGGAtaagattctctcccgggaggttccttccagcgtggattccttgattgaactcgctattcgcatagagcgacggttTGATCTTCGTcgccgagctcgtggaaaggagctcgcgttctccgttgcccccctctccgcatcactaccatcttcctccgccggctcgggttctgagcctatgcagctggggggTATCCGCAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU811910 lncRNA downstream 1672 47075860 ~ 47076089 (-) True G714296
TU811904 lncRNA downstream 7973 47069576 ~ 47069788 (-) True G714290
TU811892 lncRNA downstream 32265 47044762 ~ 47045496 (-) True G714279
TU811893 lncRNA downstream 32406 47044704 ~ 47045355 (-) False G714279
TU811886 lncRNA downstream 41444 47036027 ~ 47036317 (-) True G714276
TU811914 lncRNA upstream 1131 47079098 ~ 47079448 (-) True G714300
TU811932 lncRNA upstream 11548 47089515 ~ 47089752 (-) True G714318
TU811944 lncRNA upstream 23881 47101848 ~ 47102144 (-) True G714330
TU811951 lncRNA upstream 30368 47108335 ~ 47108690 (-) True G714337
TU812007 lncRNA upstream 40776 47118743 ~ 47119430 (-) True G714393
XM_021612672.2 mRNA downstream 9788 47051073 ~ 47067973 (-) False LOC110529973
XM_021612673.2 mRNA downstream 20054 47051073 ~ 47057707 (-) False LOC110529973
XM_021612670.2 mRNA downstream 42399 47027194 ~ 47035362 (-) True dnajc1
XM_021612671.2 mRNA downstream 50686 47015885 ~ 47027075 (-) False nebl
XM_021612689.2 mRNA upstream 152120 47230087 ~ 47260839 (-) False LOC110529976
XM_021612686.2 mRNA upstream 152120 47230087 ~ 47260840 (-) False LOC110529976
XM_021612688.2 mRNA upstream 152120 47230087 ~ 47260840 (-) False LOC110529976
XM_021612685.2 mRNA upstream 152120 47230087 ~ 47260844 (-) False LOC110529976
XM_021612687.2 mRNA upstream 152120 47230087 ~ 47260844 (-) False LOC110529976
TU811888 other downstream 20101 47051467 ~ 47057660 (-) True LOC110529973
TU811283 other downstream 752080 46311130 ~ 46325681 (-) True crfb16
TU810338 other downstream 1619513 45457777 ~ 45458248 (-) True G712814
TU808567 other downstream 2538257 44538793 ~ 44539504 (-) True G711133
TU806781 other downstream 3906679 43170760 ~ 43171082 (-) True G709454
TU812043 other upstream 100457 47178424 ~ 47178736 (-) True G714425
TU813564 other upstream 1210975 48288942 ~ 48289581 (-) True G715865
TU813956 other upstream 1464324 48542291 ~ 48616523 (-) True dlg1l
TU814203 other upstream 1681945 48759912 ~ 48761163 (-) True G716463
TU814220 other upstream 1704154 48782121 ~ 48782515 (-) True G716480

Expression Profile