Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00035710 |
| length | 754 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 2 |
| gene id | XLOC_018115 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007131.7 |
| NCBI id | CM002904.2 |
| chromosome length | 55201332 |
| location | 26920681 ~ 26937453 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0045893 | positive regulation of transcription, DNA-templated | biological_process |
| GO:0000785 | chromatin | cellular_component |
| GO:0005654 | nucleoplasm | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0004842 | ubiquitin-protein transferase activity | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-060126-4 | Predicted to enable ubiquitin-protein transferase activity. Predicted to be involved in positive regulation of transcription, DNA-templated. Predicted to be active in chromatin and nucleoplasm. |
| ensembl_id | ENSDART00000160827 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00036847 | lncRNA | downstream | 220389 | 26631070 ~ 26708526 (-) | True | XLOC_018112 |
| TCONS_00036846 | lncRNA | downstream | 220433 | 26631070 ~ 26708482 (-) | False | XLOC_018112 |
| TCONS_00036845 | lncRNA | downstream | 377682 | 26548237 ~ 26551233 (-) | False | XLOC_018110 |
| TCONS_00035697 | lncRNA | downstream | 378112 | 26548237 ~ 26550803 (-) | False | XLOC_018110 |
| TCONS_00035696 | lncRNA | downstream | 378155 | 26544250 ~ 26550760 (-) | False | XLOC_018110 |
| TCONS_00035713 | lncRNA | upstream | 22646 | 26959533 ~ 26962756 (-) | True | XLOC_018116 |
| TCONS_00035725 | lncRNA | upstream | 366961 | 27303848 ~ 27304286 (-) | False | XLOC_018122 |
| TCONS_00036849 | lncRNA | upstream | 1177877 | 28114764 ~ 28154496 (-) | False | XLOC_018129 |
| TCONS_00036850 | lncRNA | upstream | 1177877 | 28114764 ~ 28164127 (-) | False | XLOC_018129 |
| TCONS_00036851 | lncRNA | upstream | 1177877 | 28114764 ~ 28164152 (-) | True | XLOC_018129 |
| TCONS_00035707 | mRNA | downstream | 62804 | 26827265 ~ 26866111 (-) | False | XLOC_018114 |
| TCONS_00035706 | mRNA | downstream | 82887 | 26827265 ~ 26846028 (-) | False | XLOC_018114 |
| TCONS_00035708 | mRNA | downstream | 87371 | 26828870 ~ 26841544 (-) | True | XLOC_018114 |
| TCONS_00035703 | mRNA | downstream | 106365 | 26709011 ~ 26822550 (-) | False | XLOC_018113 |
| TCONS_00035714 | mRNA | upstream | 112636 | 27049523 ~ 27086143 (-) | True | XLOC_018117 |
| TCONS_00035716 | mRNA | upstream | 154021 | 27090908 ~ 27092290 (-) | True | XLOC_018119 |
| TCONS_00035717 | mRNA | upstream | 177987 | 27114874 ~ 27152495 (-) | False | XLOC_018120 |
| TCONS_00035718 | mRNA | upstream | 177987 | 27114874 ~ 27190393 (-) | True | XLOC_018120 |
| TCONS_00035719 | mRNA | upstream | 285962 | 27222849 ~ 27225876 (-) | False | XLOC_018121 |
| TCONS_00035701 | other | downstream | 340005 | 26584112 ~ 26588910 (-) | True | XLOC_018111 |
| TCONS_00035698 | other | downstream | 377682 | 26550661 ~ 26551233 (-) | True | XLOC_018110 |
| TCONS_00035691 | other | downstream | 417642 | 26502486 ~ 26511273 (-) | False | XLOC_018108 |
| TCONS_00035690 | other | downstream | 439970 | 26480428 ~ 26488945 (-) | False | XLOC_018108 |
| TCONS_00035681 | other | downstream | 536958 | 26390795 ~ 26391957 (-) | True | XLOC_018105 |
| TCONS_00035715 | other | upstream | 117208 | 27054095 ~ 27054220 (-) | True | XLOC_018118 |
| TCONS_00035722 | other | upstream | 287925 | 27224812 ~ 27225878 (-) | True | XLOC_018121 |
| TCONS_00035726 | other | upstream | 371529 | 27308416 ~ 27311615 (-) | True | XLOC_018122 |
| TCONS_00035747 | other | upstream | 1674385 | 28611272 ~ 28612322 (-) | True | XLOC_018136 |
| TCONS_00035753 | other | upstream | 1895875 | 28832762 ~ 28842571 (-) | False | XLOC_018139 |
