Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU815382 |
| length | 291 |
| lncRNA type | sense_over |
| GC content | 0.35 |
| exon number | 2 |
| gene id | G717596 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 49650591 ~ 49683675 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
49,624,000
49,628,000
49,632,000
49,636,000
49,640,000
49,644,000
49,648,000
49,652,000
49,656,000
49,660,000
49,664,000
49,668,000
49,672,000
49,676,000
49,680,000
49,684,000
49,688,000
49,692,000
NC_048572.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU815397 | lncRNA | downstream | 20052 | 49629592 ~ 49630539 (-) | True | LOC110530005 |
| TU815305 | lncRNA | downstream | 56847 | 49591230 ~ 49593744 (-) | True | G717525 |
| TU815351 | lncRNA | downstream | 71976 | 49577761 ~ 49578615 (-) | True | LOC118965614 |
| TU815345 | lncRNA | downstream | 76493 | 49573848 ~ 49574098 (-) | True | G717565 |
| TU815340 | lncRNA | downstream | 83015 | 49567369 ~ 49567576 (-) | True | G717560 |
| TU816338 | lncRNA | upstream | 58110 | 49741785 ~ 49742817 (-) | True | G718461 |
| TU816415 | lncRNA | upstream | 166566 | 49850241 ~ 49850528 (-) | True | G718537 |
| TU816419 | lncRNA | upstream | 171429 | 49855104 ~ 49855399 (-) | True | G718541 |
| TU816425 | lncRNA | upstream | 176289 | 49859964 ~ 49860783 (-) | True | G718544 |
| TU816427 | lncRNA | upstream | 180830 | 49864505 ~ 49864733 (-) | True | G718546 |
| XM_021612756.2 | mRNA | downstream | 2743 | 49635475 ~ 49647848 (-) | False | LOC110530006 |
| XM_036985551.1 | mRNA | downstream | 2743 | 49635475 ~ 49647848 (-) | True | LOC110530006 |
| XR_002474470.2 | mRNA | downstream | 19822 | 49629577 ~ 49630769 (-) | False | LOC110530005 |
| XM_021612754.2 | mRNA | downstream | 38362 | 49601539 ~ 49612229 (-) | True | LOC110530004 |
| XR_005053024.1 | mRNA | downstream | 71784 | 49577103 ~ 49578807 (-) | False | LOC118965614 |
| XM_021612765.2 | mRNA | upstream | 182597 | 49866272 ~ 49909160 (-) | False | LOC110530011 |
| XM_021612766.2 | mRNA | upstream | 182597 | 49866272 ~ 49909160 (-) | False | LOC110530011 |
| XM_021612767.2 | mRNA | upstream | 182598 | 49866273 ~ 49921500 (-) | False | LOC110530011 |
| XM_036985558.1 | mRNA | upstream | 182599 | 49866274 ~ 49937001 (-) | False | LOC110530011 |
| XR_005052889.1 | mRNA | upstream | 197968 | 49881643 ~ 49886226 (-) | False | LOC118965522 |
| TU814229 | other | downstream | 861629 | 48788521 ~ 48788962 (-) | True | G716488 |
| TU814220 | other | downstream | 868076 | 48782121 ~ 48782515 (-) | True | G716480 |
| TU814203 | other | downstream | 889428 | 48759912 ~ 48761163 (-) | True | G716463 |
| TU813956 | other | downstream | 1034068 | 48542291 ~ 48616523 (-) | True | dlg1l |
| TU813564 | other | downstream | 1361010 | 48288942 ~ 48289581 (-) | True | G715865 |
| TU816366 | other | upstream | 101999 | 49785674 ~ 49837696 (-) | True | G718489 |
| TU816422 | other | upstream | 182955 | 49866630 ~ 49889252 (-) | False | LOC110530011 |
| TU817090 | other | upstream | 1253253 | 50936928 ~ 50939471 (-) | True | G719151 |
| TU817704 | other | upstream | 1568680 | 51252355 ~ 51259019 (-) | True | LOC110530043 |
| TU819491 | other | upstream | 3077364 | 52761039 ~ 52761451 (-) | True | G721275 |
