Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU820002 |
| length | 294 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G721766 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 53443792 ~ 53444085 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
53,441,600
53,442,000
53,442,400
53,442,800
53,443,200
53,443,600
53,444,000
53,444,400
53,444,800
53,445,200
53,445,600
53,446,000
NC_048572.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU819983 | lncRNA | downstream | 12840 | 53430703 ~ 53430952 (-) | True | G721747 |
| TU819940 | lncRNA | downstream | 56112 | 53387475 ~ 53387680 (-) | True | G721704 |
| TU819918 | lncRNA | downstream | 67545 | 53376030 ~ 53376247 (-) | True | G721685 |
| TU819870 | lncRNA | downstream | 102830 | 53340741 ~ 53340962 (-) | True | G721638 |
| TU819863 | lncRNA | downstream | 112796 | 53330465 ~ 53330996 (-) | True | G721631 |
| TU820019 | lncRNA | upstream | 13737 | 53457822 ~ 53458026 (-) | True | G721782 |
| TU820028 | lncRNA | upstream | 18338 | 53462423 ~ 53462852 (-) | False | LOC110529122 |
| TU820041 | lncRNA | upstream | 19715 | 53463800 ~ 53477483 (-) | True | LOC110529122 |
| TU820062 | lncRNA | upstream | 36808 | 53480893 ~ 53481125 (-) | True | G721825 |
| TU820770 | lncRNA | upstream | 51719 | 53495804 ~ 53497427 (-) | False | G722459 |
| XM_036985657.1 | mRNA | downstream | 83547 | 53342603 ~ 53360245 (-) | True | nsun4 |
| XM_036985654.1 | mRNA | downstream | 185277 | 53255197 ~ 53258515 (-) | True | LOC110530106 |
| XM_021612923.2 | mRNA | downstream | 185962 | 53255197 ~ 53257830 (-) | False | LOC110530106 |
| XM_036985655.1 | mRNA | downstream | 186203 | 53255197 ~ 53257589 (-) | False | LOC110530106 |
| XM_021612915.2 | mRNA | downstream | 376006 | 53059646 ~ 53067786 (-) | True | dipk1aa |
| XM_021611263.2 | mRNA | upstream | 17949 | 53462034 ~ 53478913 (-) | False | LOC110529122 |
| XM_036985658.1 | mRNA | upstream | 17949 | 53462034 ~ 53478913 (-) | False | LOC110529122 |
| XM_021612937.2 | mRNA | upstream | 56371 | 53500456 ~ 53569137 (-) | False | LOC110530111 |
| XM_021612934.2 | mRNA | upstream | 56371 | 53500456 ~ 53569139 (-) | False | LOC110530111 |
| XM_021612935.2 | mRNA | upstream | 56371 | 53500456 ~ 53585618 (-) | False | LOC110530111 |
| TU819491 | other | downstream | 682341 | 52761039 ~ 52761451 (-) | True | G721275 |
| TU817704 | other | downstream | 2184773 | 51252355 ~ 51259019 (-) | True | LOC110530043 |
| TU817090 | other | downstream | 2504321 | 50936928 ~ 50939471 (-) | True | G719151 |
| TU816422 | other | downstream | 3554540 | 49866630 ~ 49889252 (-) | False | LOC110530011 |
| TU816366 | other | downstream | 3606096 | 49785674 ~ 49837696 (-) | True | G718489 |
| TU820029 | other | upstream | 19097 | 53463182 ~ 53463764 (-) | False | LOC110529122 |
| TU820769 | other | upstream | 54063 | 53498148 ~ 53499730 (-) | True | G722459 |
| TU820950 | other | upstream | 359358 | 53803443 ~ 53856065 (-) | True | G722602 |
| TU821019 | other | upstream | 482143 | 53926228 ~ 53927959 (-) | True | G722670 |
| TU821119 | other | upstream | 680294 | 54124379 ~ 54139341 (-) | True | G722761 |
