Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU824634 |
| length | 1514 |
| lncRNA type | intronic |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G725886 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 57524846 ~ 57529724 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
57,521,000
57,522,000
57,523,000
57,524,000
57,525,000
57,526,000
57,527,000
57,528,000
57,529,000
57,530,000
57,531,000
57,532,000
57,533,000
57,534,000
NC_048572.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU824618 | lncRNA | upstream | 17686 | 57506661 ~ 57507160 (+) | True | G725872 |
| TU824612 | lncRNA | upstream | 21256 | 57500533 ~ 57503590 (+) | True | G725869 |
| TU824559 | lncRNA | upstream | 106169 | 57418357 ~ 57418677 (+) | True | G725818 |
| TU824550 | lncRNA | upstream | 116434 | 57408074 ~ 57408412 (+) | True | G725809 |
| TU824329 | lncRNA | upstream | 382145 | 57136832 ~ 57142701 (+) | False | G725615 |
| TU824640 | lncRNA | downstream | 6514 | 57536238 ~ 57536464 (+) | True | G725892 |
| TU824643 | lncRNA | downstream | 9569 | 57539293 ~ 57539548 (+) | True | G725895 |
| TU824653 | lncRNA | downstream | 20066 | 57549790 ~ 57550018 (+) | True | G725905 |
| TU824654 | lncRNA | downstream | 23114 | 57552838 ~ 57553144 (+) | True | G725906 |
| TU824620 | lncRNA | downstream | 51932 | 57581656 ~ 57581766 (+) | True | LOC110530216 |
| XM_036985771.1 | mRNA | upstream | 45991 | 57421244 ~ 57478855 (+) | False | LOC110530213 |
| XM_036985770.1 | mRNA | upstream | 45991 | 57421246 ~ 57478855 (+) | False | LOC110530213 |
| XM_036985769.1 | mRNA | upstream | 45991 | 57421249 ~ 57478855 (+) | False | LOC110530213 |
| XM_036984516.1 | mRNA | upstream | 163033 | 57339596 ~ 57361813 (+) | False | car8 |
| XM_036985773.1 | mRNA | downstream | 28304 | 57558028 ~ 57565135 (+) | False | LOC110530217 |
| XM_036985772.1 | mRNA | downstream | 28304 | 57558028 ~ 57572376 (+) | True | LOC110530217 |
| XM_021613104.2 | mRNA | downstream | 42927 | 57572651 ~ 57582193 (+) | False | LOC110530216 |
| XM_036985774.1 | mRNA | downstream | 68111 | 57597835 ~ 57625254 (+) | False | eif4g1a |
| XM_036985776.1 | mRNA | downstream | 68111 | 57597835 ~ 57625254 (+) | False | eif4g1a |
| TU824624 | other | upstream | 9452 | 57513606 ~ 57515394 (+) | False | G725878 |
| TU824625 | other | upstream | 9452 | 57513606 ~ 57515394 (+) | True | G725878 |
| TU824563 | other | upstream | 47117 | 57468872 ~ 57477729 (+) | True | LOC110530213 |
| TU824284 | other | upstream | 540561 | 56983570 ~ 56984285 (+) | True | G725573 |
| TU822550 | other | upstream | 1806609 | 55710240 ~ 55718237 (+) | False | si:ch211-267e7.3 |
| TU824655 | other | downstream | 24999 | 57554723 ~ 57555482 (+) | True | G725907 |
| TU824799 | other | downstream | 323288 | 57853012 ~ 57853632 (+) | True | LOC118965533 |
| TU826058 | other | downstream | 827315 | 58357039 ~ 58358135 (+) | False | G727161 |
| TU826259 | other | downstream | 1117135 | 58646859 ~ 58674005 (+) | True | G727348 |
| TU827009 | other | downstream | 1451207 | 58980931 ~ 58981271 (+) | True | G728057 |
