RNA id: TU826173



Basic Information


Item Value
RNA id TU826173
length 323
lncRNA type intronic
GC content 0.48
exon number 2
gene id G727266
representative False

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 58511905 ~ 58513971 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ggagaacagagtagaggagaacagaggagaggagaacagaggtgagtagaggagaacagaggagaggagaatagagaagaatagaggagaggagaacagaggagaggagaggagatcaaaTGAGcgtggagaagaagagaacataggagaacagaggagagtggaggataacagagtagaggagaacagaggagagcagaggagaacagaggagagtagaagagaacagaggagagtagaagagaacagaggagagtagaagagaacatagtagaggagaacagagtagaggtgaacagaggagaggagaggagaacagagga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU826059 lncRNA upstream 153660 58357039 ~ 58358245 (+) True G727161
TU826020 lncRNA upstream 216627 58294310 ~ 58295278 (+) True G727124
TU825945 lncRNA upstream 243202 58265560 ~ 58268703 (+) True LOC110530232
TU825987 lncRNA upstream 279948 58228530 ~ 58231957 (+) True G727091
TU824994 lncRNA upstream 353193 58157832 ~ 58158712 (+) True G726210
TU826248 lncRNA downstream 115196 58629167 ~ 58649516 (+) True G727338
TU826919 lncRNA downstream 398184 58912155 ~ 58912367 (+) True G727973
TU826936 lncRNA downstream 409759 58923730 ~ 58923983 (+) True G727987
TU827011 lncRNA downstream 467433 58981404 ~ 58981618 (+) True G728059
TU827196 lncRNA downstream 597191 59111162 ~ 59112437 (+) True G728232
XM_021613129.2 mRNA upstream 243522 58165647 ~ 58268383 (+) False LOC110530232
XM_036985802.1 mRNA upstream 243522 58205592 ~ 58268383 (+) False LOC110530232
XM_036985798.1 mRNA upstream 375727 57932298 ~ 58136178 (+) True LOC110530231
XM_036985799.1 mRNA upstream 375728 57932298 ~ 58136177 (+) False LOC110530231
XM_036985801.1 mRNA upstream 422014 57932295 ~ 58089891 (+) False LOC110530231
LOC118965657 mRNA downstream 158596 58672567 ~ 58672675 (+) True LOC118965657
XM_036985805.1 mRNA downstream 543445 59057416 ~ 59084854 (+) False LOC110530235
XM_036985807.1 mRNA downstream 543445 59057416 ~ 59084854 (+) True LOC110530235
XM_021613133.2 mRNA downstream 674096 59188067 ~ 59211817 (+) True LOC110530237
XM_021613151.2 mRNA downstream 1234697 59748668 ~ 59768093 (+) False LOC110530248
TU826058 other upstream 153770 58357039 ~ 58358135 (+) False G727161
TU824799 other upstream 658273 57853012 ~ 57853632 (+) True LOC118965533
TU824655 other upstream 956423 57554723 ~ 57555482 (+) True G725907
TU824624 other upstream 996511 57513606 ~ 57515394 (+) False G725878
TU826259 other downstream 132888 58646859 ~ 58674005 (+) True G727348
TU827009 other downstream 466960 58980931 ~ 58981271 (+) True G728057
TU827614 other downstream 1246504 59760475 ~ 59766358 (+) True LOC110530248
TU829329 other downstream 2526597 61040568 ~ 61042129 (+) True G730206
TU829420 other downstream 2644839 61158810 ~ 61159193 (+) True G730267

Expression Profile