RNA id: TU830095



Basic Information


Item Value
RNA id TU830095
length 303
lncRNA type intronic
GC content 0.40
exon number 2
gene id G730852
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 62117575 ~ 62119475 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CCATCAACTATACAATTATCACATACAGCTTGAAAAGATGTCTTGAGCAAAGGAACTACAAAAGGGTACAAGTATTACGTTTCTACCTGGACTAGCTAcatataaatcatttcacatcTGACACCTgacccataattatccGTTTTCTCCCCTTTGCAGAGTGCCTTGAAAGAAGAATTCACATTTACCTTGCTTTTCCCCCAACCACAAGGGGATCATCACTCAGAACAGGCTAAAATTACCCTGCAAGAGTCTGCATGCCTGTGTAATACATCTCTTTCACAGACGCACACTGTCTATAAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU830049 lncRNA upstream 46686 62068134 ~ 62070889 (+) False G730813
TU830050 lncRNA upstream 46686 62068134 ~ 62070889 (+) True G730813
TU830060 lncRNA upstream 50006 62067204 ~ 62067569 (+) True G730821
TU830058 lncRNA upstream 51518 62065831 ~ 62066057 (+) True G730819
TU830057 lncRNA upstream 51763 62065524 ~ 62065812 (+) True G730818
TU830243 lncRNA downstream 182357 62301832 ~ 62303132 (+) True G730987
TU831390 lncRNA downstream 242162 62361637 ~ 62361989 (+) True G731993
TU831392 lncRNA downstream 243624 62363099 ~ 62363301 (+) True G731995
TU831401 lncRNA downstream 250835 62370310 ~ 62370540 (+) True G732004
TU831404 lncRNA downstream 252301 62371776 ~ 62372044 (+) True G732007
XM_021613224.2 mRNA upstream 71398 62034615 ~ 62046177 (+) True LOC110530301
XM_036986879.1 mRNA upstream 742111 61370585 ~ 61375464 (+) True LOC110530952
XR_005052928.1 mRNA upstream 772690 61343796 ~ 61344885 (+) False LOC118965539
XM_021613210.2 mRNA upstream 777963 61327148 ~ 61339612 (+) True LOC110530280
XM_036985914.1 mRNA upstream 811897 61297965 ~ 61305678 (+) True LOC110530279
XM_021613231.2 mRNA downstream 169095 62288570 ~ 62299158 (+) False LOC110530305
XM_021613229.2 mRNA downstream 169115 62288590 ~ 62299158 (+) False LOC110530305
XM_021613228.2 mRNA downstream 169116 62288591 ~ 62299158 (+) False LOC110530305
XM_036985936.1 mRNA downstream 169116 62288591 ~ 62299158 (+) False LOC110530305
XM_036985935.1 mRNA downstream 169132 62288607 ~ 62299158 (+) True LOC110530305
TU829919 other upstream 246015 61867561 ~ 61871560 (+) False G730694
TU829914 other upstream 256456 61860485 ~ 61861119 (+) True G730690
TU829843 other upstream 301965 61815071 ~ 61815610 (+) True G730629
TU829804 other upstream 420934 61696147 ~ 61696641 (+) True G730590
TU829659 other upstream 488382 61628553 ~ 61629193 (+) True G730464
TU831449 other downstream 283474 62402949 ~ 62404191 (+) True G732052
TU831769 other downstream 678226 62797701 ~ 62882948 (+) True G732350
TU832575 other downstream 1080025 63199500 ~ 63204896 (+) False LOC118965541
TU832811 other downstream 1256021 63375496 ~ 63385250 (+) False LOC110530316
TU832812 other downstream 1256021 63375496 ~ 63427667 (+) True LOC110530316

Expression Profile