RNA id: TU835190



Basic Information


Item Value
RNA id TU835190
length 275
lncRNA type intronic
GC content 0.41
exon number 2
gene id G735498
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 65377769 ~ 65378118 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CTGAAATATTTATGCTGAGTATTATGTTTACCAATAGATGGCAGTATTGATTCAAAACGGGGTTTGCTTTCTGCTATCCGTCGGCGTTTAAATGTCTGCCATATATATCGTGCTCGAGAAAGCCTAGTTTTACACCAGGTGCTTTCTGCTATCTGTCGACGTTTAAATGTCTGCCATATATATCGTGCTCGAGAAAGCCTAGTTTTACACCAGGTGCTTTCTGCTATCCGTCGACGTTTAAATGTCTGCCATATATATCGTGCTCGAGAAAGCCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU835112 lncRNA upstream 102456 65270075 ~ 65275313 (+) True G735431
TU834978 lncRNA upstream 235179 65129970 ~ 65142590 (+) True G735303
TU834976 lncRNA upstream 247217 65058158 ~ 65130552 (+) False G735303
TU834887 lncRNA upstream 415168 64962299 ~ 64962601 (+) True G735243
TU834886 lncRNA upstream 415549 64961995 ~ 64962220 (+) True G735242
TU835191 lncRNA downstream 11483 65389601 ~ 65390041 (+) True G735499
TU835224 lncRNA downstream 50094 65428212 ~ 65433525 (+) True G735530
TU835231 lncRNA downstream 60980 65439098 ~ 65442283 (+) True G735537
TU835233 lncRNA downstream 69266 65447384 ~ 65447630 (+) True G735538
TU835267 lncRNA downstream 106902 65485020 ~ 65485307 (+) True G735569
XM_021611267.2 mRNA upstream 114848 65261636 ~ 65262921 (+) True LOC110529128
XM_036985978.1 mRNA upstream 123796 65142215 ~ 65253973 (+) False dlgap1a
XM_021613339.2 mRNA downstream 38158 65416276 ~ 65421979 (+) True LOC110530354
XM_021613344.2 mRNA downstream 133345 65511463 ~ 65520143 (+) True LOC110530357
XM_021613347.2 mRNA downstream 183575 65561693 ~ 65587630 (+) True LOC110530359
XM_021613348.2 mRNA downstream 221213 65599331 ~ 65602141 (+) False LOC110530360
XM_021613350.2 mRNA downstream 276321 65654439 ~ 65657897 (+) True pi15b
TU835130 other upstream 29272 65324935 ~ 65348497 (+) True si:ch211-207d6.2
TU834704 other upstream 546866 64830624 ~ 64830903 (+) True G735064
TU834687 other upstream 555724 64821615 ~ 64822045 (+) True G735047
TU834343 other upstream 679900 64697313 ~ 64697869 (+) False LOC110530343
TU834286 other upstream 757762 64619040 ~ 64620007 (+) False G734690
TU835205 other downstream 24105 65402223 ~ 65403099 (+) True G735512
TU835317 other downstream 221267 65599385 ~ 65601897 (+) True LOC110530360
TU835372 other downstream 288748 65666866 ~ 65668095 (+) True LOC110530364
TU836376 other downstream 746090 66124208 ~ 66125338 (+) True si:ch211-106n13.3
TU837120 other downstream 1276544 66654662 ~ 66655753 (+) True G737194

Expression Profile