RNA id: TU835267



Basic Information


Item Value
RNA id TU835267
length 288
lncRNA type antisense_over
GC content 0.45
exon number 1
gene id G735569
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 65485020 ~ 65485307 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CTGCTTTCACAGAACAATGAATATGGGCTTTGGATTCATAATTGACCCAGTCGAATCCTGCCTCCACCGCGAGCCGGGATAGCATTCCATATTTGCTCTTATCTCTGTCAGAGGTGGTGATATCCACAGCCCTTCCTTCATAGTGTAAAGATTCTTCGAAATGGTGTCCATCCTCGTCCCAGCCTTCTGTCACGCGCAGCTTCACTCCCGGCCATTGATTCATGACTGAAATAGCCAAAGAGTTCAGTTTGTCCTTACATCTCTGAAAAGCATAAATAGATAATTGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU835233 lncRNA upstream 37390 65447384 ~ 65447630 (+) True G735538
TU835231 lncRNA upstream 42737 65439098 ~ 65442283 (+) True G735537
TU835224 lncRNA upstream 51495 65428212 ~ 65433525 (+) True G735530
TU835191 lncRNA upstream 94979 65389601 ~ 65390041 (+) True G735499
TU835190 lncRNA upstream 106902 65377769 ~ 65378118 (+) True G735498
TU835268 lncRNA downstream 1474 65486781 ~ 65487147 (+) True G735570
TU835271 lncRNA downstream 6545 65491852 ~ 65492149 (+) True G735573
TU835320 lncRNA downstream 89798 65575105 ~ 65600245 (+) True G735619
TU835362 lncRNA downstream 159519 65644826 ~ 65645051 (+) True G735656
TU835387 lncRNA downstream 203399 65688706 ~ 65750913 (+) True G735678
XM_021613339.2 mRNA upstream 63041 65416276 ~ 65421979 (+) True LOC110530354
XM_021613336.2 mRNA upstream 98480 65300995 ~ 65386540 (+) False si:ch211-207d6.2
XM_021613344.2 mRNA downstream 26156 65511463 ~ 65520143 (+) True LOC110530357
XM_021613347.2 mRNA downstream 76386 65561693 ~ 65587630 (+) True LOC110530359
XM_021613348.2 mRNA downstream 114024 65599331 ~ 65602141 (+) False LOC110530360
XM_021613350.2 mRNA downstream 169132 65654439 ~ 65657897 (+) True pi15b
XM_036985992.1 mRNA downstream 173982 65659289 ~ 65670369 (+) False LOC110530364
TU835205 other upstream 81921 65402223 ~ 65403099 (+) True G735512
TU835130 other upstream 136523 65324935 ~ 65348497 (+) True si:ch211-207d6.2
TU834704 other upstream 654117 64830624 ~ 64830903 (+) True G735064
TU834687 other upstream 662975 64821615 ~ 64822045 (+) True G735047
TU834343 other upstream 787151 64697313 ~ 64697869 (+) False LOC110530343
TU835317 other downstream 114078 65599385 ~ 65601897 (+) True LOC110530360
TU835372 other downstream 181559 65666866 ~ 65668095 (+) True LOC110530364
TU836376 other downstream 638901 66124208 ~ 66125338 (+) True si:ch211-106n13.3
TU837120 other downstream 1169355 66654662 ~ 66655753 (+) True G737194
TU837146 other downstream 1214379 66699686 ~ 66704085 (+) True kncn

Expression Profile