RNA id: TU838160



Basic Information


Item Value
RNA id TU838160
length 204
lncRNA type intronic
GC content 0.51
exon number 2
gene id G738126
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 67341197 ~ 67342012 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTATTGTGCCGTTAGGTATTGTGCCGTTAGGTGTTGTGCCGTTAGGTGTTGTGCCGTTAGGTGTTGTGCCGTTAGGTGTTAGGTATTGTGCCGTTAGGTATTGTCGTGCAGTTTGGTGTCGTGCAGTTTGGTGTCGTGCAGTTAGGTGTCGTGCCGTTAGGTGTTGTGCCGTTAGGTGTTGTGCCGTTAGGTGTTGTGTTGTGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU838159 lncRNA upstream 3836 67336689 ~ 67337361 (+) True G738125
TU838107 lncRNA upstream 75863 67265106 ~ 67265334 (+) True G738078
TU838104 lncRNA upstream 77828 67263121 ~ 67263369 (+) True G738075
TU838074 lncRNA upstream 98345 67242448 ~ 67242852 (+) True G738045
TU838066 lncRNA upstream 101768 67239229 ~ 67239429 (+) True G738037
TU838184 lncRNA downstream 54868 67396880 ~ 67397112 (+) True G738149
TU838133 lncRNA downstream 87473 67429485 ~ 67430037 (+) True LOC110530401
TU838316 lncRNA downstream 233859 67575871 ~ 67576087 (+) True G738260
TU838318 lncRNA downstream 234759 67576771 ~ 67577106 (+) True G738262
TU838407 lncRNA downstream 431436 67773448 ~ 67775640 (+) True G738344
XM_036986021.1 mRNA upstream 286443 66975681 ~ 67054754 (+) False arhgap21b
XM_021613421.2 mRNA downstream 88841 67430853 ~ 67474302 (+) False LOC110530403
XM_021613424.2 mRNA downstream 88841 67430853 ~ 67474302 (+) False LOC110530403
XM_021613425.2 mRNA downstream 88841 67430853 ~ 67474302 (+) False LOC110530403
XR_002474523.2 mRNA downstream 88841 67430853 ~ 67474302 (+) False LOC110530403
XR_002474524.2 mRNA downstream 88841 67430853 ~ 67474302 (+) False LOC110530403
TU838049 other upstream 109284 67231182 ~ 67231913 (+) True G738020
TU837788 other upstream 125568 67170467 ~ 67215629 (+) True G737783
TU837166 other upstream 539117 66798573 ~ 66802080 (+) False G737234
TU837167 other upstream 540137 66798573 ~ 66801060 (+) True G737234
TU837146 other upstream 637112 66699686 ~ 66704085 (+) True kncn
TU838300 other downstream 204117 67546129 ~ 67547609 (+) True G738244
TU838937 other downstream 564365 67906377 ~ 67922622 (+) True LOC110530413
TU839857 other downstream 1516371 68858383 ~ 68858753 (+) True G739648
TU839882 other downstream 1561353 68903365 ~ 68906965 (+) True G739670
TU839922 other downstream 1662325 69004337 ~ 69005116 (+) True G739708

Expression Profile