RNA id: TU845350



Basic Information


Item Value
RNA id TU845350
length 327
RNA type TUCP
GC content 0.43
exon number 2
gene id G744696
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 72862256 ~ 72864703 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtggtatgtactaaagacgacatggtggtatgtactaaagacgacatggtggtatgtactaaagacgacatggtggtatgtactaaagacgacatggtggtgtgtactaaagacgacatggtggtatgtactaaagacgacatggtggtatgtactaaagacgacatggtggtatgtactaaagacgacatggtggtatgtactaaagacaacatggtggtatgtactaaagacgacgtGGTGgtgtgtactaaagacgacatggtggtgtgtactaaagacgacatggtggtgtgTACTAAAGACAACATGGTGgtgtgtactaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU845321 lncRNA upstream 63289 72797741 ~ 72798967 (+) True G744668
TU845270 lncRNA upstream 132170 72729708 ~ 72730086 (+) True G744625
TU844904 lncRNA upstream 306700 72551376 ~ 72555556 (+) False LOC110530976
TU844879 lncRNA upstream 349010 72512866 ~ 72513246 (+) True G744267
TU844876 lncRNA upstream 350666 72511386 ~ 72511590 (+) True G744264
TU845353 lncRNA downstream 7996 72872699 ~ 72873138 (+) True G744698
TU845459 lncRNA downstream 19678 72884381 ~ 72884637 (+) True G744795
TU845460 lncRNA downstream 20564 72885267 ~ 72885548 (+) True G744796
TU845470 lncRNA downstream 23169 72887872 ~ 72888104 (+) True G744806
TU845481 lncRNA downstream 34957 72899660 ~ 72899959 (+) True G744817
XM_036986152.1 mRNA upstream 148191 72634238 ~ 72714065 (+) False LOC110530502
XM_021613645.2 mRNA upstream 148191 72667964 ~ 72714065 (+) False LOC110530502
XM_021613643.2 mRNA upstream 151105 72667964 ~ 72711151 (+) False LOC110530502
LOC110530976 mRNA upstream 306971 72542055 ~ 72555285 (+) False LOC110530976
XM_021613639.2 mRNA upstream 351748 72507698 ~ 72510508 (+) False LOC110530499
XM_021613652.2 mRNA downstream 36515 72901218 ~ 72909612 (+) False LOC110530508
XM_036986157.1 mRNA downstream 36552 72901255 ~ 72909612 (+) False LOC110530508
XM_021613653.2 mRNA downstream 36924 72901627 ~ 72909612 (+) True LOC110530508
XM_036986158.1 mRNA downstream 86499 72951202 ~ 72975991 (+) False LOC110530509
XR_005052946.1 mRNA downstream 86499 72951202 ~ 72975991 (+) False LOC110530509
TU844866 other upstream 219518 72634884 ~ 72642738 (+) True LOC110530502
TU844903 other upstream 306700 72542726 ~ 72555556 (+) False LOC110530976
TU845352 other downstream 2398 72867101 ~ 72868382 (+) True G744697
TU845764 other downstream 384721 73249424 ~ 73250496 (+) True G745083
TU846133 other downstream 728934 73593637 ~ 73595238 (+) True G745410
TU846223 other downstream 855013 73719716 ~ 73720650 (+) True G745489
TU846883 other downstream 2087982 74952685 ~ 74953654 (+) False G746052

Expression Profile