RNA id: TU846037



Basic Information


Item Value
RNA id TU846037
length 443
lncRNA type antisense_over
GC content 0.58
exon number 2
gene id G745325
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 73442724 ~ 73443676 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CCTGGACTCCCGTCTCAGAGTGCTGGTTTTGACACCTGCTTGGAGCTCCGAGCTGGCTGACTCTCCTCCGGCTGATGACATCCTCCTGGGTCCTTCCTGTCCACAGTCCTCCTCACAGCAGATCCACCATGGGGTTATCACTCCTCTGCTGCCTCCTGTGGACTAGTCCCCTATCCCCTACTCCAGGATGGTTATCACACACACCCTACCTCCTTTGGACTGCCCGCAACCCAACTGTCCCCTACCCCCTGTCCCCTACTCCAGGTCTAGGACAGAGCCCCTACTCTCTCTGCTCCAGGTCTAGGACAGAGCCACTACTCTCTCTGCTCCAGGTCTAGGACAGAGCCACTACTCTCTCTGCTCCAGGTCTAGGACAGAGCCACTACTCCCTCTACTCCAGGTCTAGGACAGAGCCACTACTCCCTCTGCTCCAGGTCTAGGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU846013 lncRNA upstream 42762 73397908 ~ 73399962 (+) False G745305
TU846014 lncRNA upstream 42762 73397908 ~ 73399962 (+) True G745305
TU846011 lncRNA upstream 45222 73396993 ~ 73397502 (+) True G745304
TU845994 lncRNA upstream 46306 73394891 ~ 73396418 (+) True G745291
TU845988 lncRNA upstream 59969 73382545 ~ 73382755 (+) True G745286
TU846096 lncRNA downstream 40672 73484348 ~ 73484586 (+) True G745379
TU846130 lncRNA downstream 120160 73563836 ~ 73621000 (+) False G745407
TU846129 lncRNA downstream 125695 73569371 ~ 73621000 (+) False G745407
TU846151 lncRNA downstream 156308 73599984 ~ 73604429 (+) True G745426
TU846153 lncRNA downstream 163223 73606899 ~ 73607383 (+) True G745428
NM_001124624.1 mRNA upstream 51307 73385749 ~ 73391417 (+) True c8a
XM_021613674.2 mRNA upstream 107890 73325167 ~ 73334834 (+) True LOC110530520
XM_021613673.2 mRNA upstream 122167 73313991 ~ 73320557 (+) False LOC110530519
XM_021613672.2 mRNA upstream 122167 73314305 ~ 73320557 (+) True LOC110530519
XM_036986854.1 mRNA upstream 152183 73287251 ~ 73290541 (+) True LOC110530979
XM_021613688.2 mRNA downstream 248624 73692300 ~ 73696186 (+) True LOC110530527
XR_002474545.2 mRNA downstream 258734 73702410 ~ 73704583 (+) False LOC110530528
XR_005052949.1 mRNA downstream 258734 73702410 ~ 73704583 (+) False LOC110530528
XM_036986183.1 mRNA downstream 262150 73705826 ~ 73719262 (+) True LOC110530529
XM_021613694.2 mRNA downstream 291151 73734827 ~ 73736698 (+) True LOC110530532
TU845764 other upstream 192228 73249424 ~ 73250496 (+) True G745083
TU845309 other upstream 570420 72860408 ~ 72872304 (+) True LOC110530507
TU845352 other upstream 574342 72867101 ~ 72868382 (+) True G744697
TU845350 other upstream 578021 72862256 ~ 72864703 (+) True G744696
TU844866 other upstream 799986 72634884 ~ 72642738 (+) True LOC110530502
TU846133 other downstream 149961 73593637 ~ 73595238 (+) True G745410
TU846223 other downstream 276040 73719716 ~ 73720650 (+) True G745489
TU846883 other downstream 1509009 74952685 ~ 74953654 (+) False G746052
TU846909 other downstream 1570968 75014644 ~ 75033896 (+) False nedd8
TU846908 other downstream 1579488 75023164 ~ 75033896 (+) False nedd8

Expression Profile