RNA id: TU848615



Basic Information


Item Value
RNA id TU848615
length 218
lncRNA type inter_gene
GC content 0.52
exon number 2
gene id G747508
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 75769640 ~ 75770618 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cacacagacagacagagacagacagacagacagacagacgcacacacagacagacaggacagacgcacacagacaaacacacacacacacacagacagacagacacacgcacacacagatacacacacaggcaaactcacacacacacacacacgcacagacagacagacgcacacacacagacacacgcacacacagacacacacacacacagaaag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU848167 lncRNA upstream 72443 75688365 ~ 75697197 (+) True G747118
TU848166 lncRNA upstream 77786 75688365 ~ 75691854 (+) False G747118
TU848146 lncRNA upstream 98453 75670792 ~ 75671187 (+) True G747098
TU848101 lncRNA upstream 162407 75605375 ~ 75607233 (+) True G747065
TU848068 lncRNA upstream 226154 75542967 ~ 75543486 (+) True G747038
TU848623 lncRNA downstream 11659 75782277 ~ 75782622 (+) True G747516
TU848624 lncRNA downstream 12440 75783058 ~ 75783283 (+) True G747517
TU848632 lncRNA downstream 31355 75801973 ~ 75802216 (+) True G747525
TU848635 lncRNA downstream 37207 75807825 ~ 75808298 (+) True G747528
TU848636 lncRNA downstream 39446 75810064 ~ 75810320 (+) True G747529
XM_021613846.2 mRNA upstream 96819 75666314 ~ 75672821 (+) True LOC110530632
trnae-cuc-7 mRNA upstream 108120 75661449 ~ 75661520 (+) True trnae-cuc-7
XM_021613844.2 mRNA upstream 124346 75641254 ~ 75645294 (+) False LOC110530631
XM_021613845.2 mRNA upstream 124346 75641254 ~ 75645294 (+) True LOC110530631
XM_021613842.2 mRNA upstream 151380 75613940 ~ 75618260 (+) True LOC110530629
XM_021613848.2 mRNA downstream 24639 75795257 ~ 75799474 (+) True LOC110530636
LOC110530988 mRNA downstream 30655 75801273 ~ 75826734 (+) True LOC110530988
XM_036986274.1 mRNA downstream 188390 75959008 ~ 75997054 (+) False LOC110530640
XM_036986272.1 mRNA downstream 211030 75981648 ~ 75997054 (+) False LOC110530640
XM_036986271.1 mRNA downstream 211031 75981649 ~ 75997054 (+) False LOC110530640
TU847964 other upstream 386512 75379502 ~ 75383128 (+) False G746951
TU847837 other upstream 412483 75350208 ~ 75357157 (+) False LOC110530987
TU847942 other upstream 441445 75327772 ~ 75328195 (+) True G746936
TU846908 other upstream 735744 75023164 ~ 75033896 (+) False nedd8
TU848805 other downstream 345075 76115693 ~ 76115986 (+) True G747680
TU849158 other downstream 469332 76239950 ~ 76394329 (+) True G747987
TU849434 other downstream 680952 76451570 ~ 76452437 (+) True LOC110530655
TU849632 other downstream 936112 76706730 ~ 76707644 (+) False G748432
TU850161 other downstream 1380045 77150663 ~ 77177349 (+) True G748905

Expression Profile