RNA id: TU849972


Basic Information

Item Value
RNA id TU849972
length 237
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G748740
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 76882102 ~ 76882338 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

CTTCCATAGACTACATGTTAATTATGACAAcatccggaggacgtcctccaaccaatcaaagcttgTTTGAACTGACATGTTATCCAtctaatcaaaggatcagagaatgaacctAGTACTGCGCATGTGTAATTTAGAAGCTTGGTGAGTTGGTGACATAAATGGAAAGATTGAGATTGAGATAGTGAAAAGGGATAGTTGAGCATTTTTAGGATATTATTCACTTCAAAATAATGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU849959 lncRNA upstream 11329 76870551 ~ 76870773 (+) True G748727
TU849956 lncRNA upstream 13129 76868718 ~ 76868973 (+) True G748724
TU849818 lncRNA upstream 116054 76765819 ~ 76766048 (+) True G748590
TU849815 lncRNA upstream 116814 76764973 ~ 76765288 (+) True G748587
TU849805 lncRNA upstream 124365 76757516 ~ 76757737 (+) True G748577
TU849975 lncRNA downstream 1847 76884185 ~ 76907217 (+) True G748743
TU850009 lncRNA downstream 29022 76911360 ~ 76911586 (+) True G748776
TU850012 lncRNA downstream 32338 76914676 ~ 76914875 (+) True G748779
TU850026 lncRNA downstream 50386 76932724 ~ 76933130 (+) False G748793
TU850027 lncRNA downstream 50386 76932724 ~ 76933316 (+) True G748793
XM_036986283.1 mRNA upstream 161574 76526810 ~ 76720528 (+) False LOC110530656
XM_036986284.1 mRNA upstream 161574 76526810 ~ 76720528 (+) False LOC110530656
XM_036986291.1 mRNA upstream 207090 76526816 ~ 76675012 (+) False LOC110530656
XM_036986286.1 mRNA upstream 207186 76526812 ~ 76674916 (+) False LOC110530656
XM_036986290.1 mRNA upstream 211650 76526812 ~ 76670452 (+) False LOC110530656
XM_036986298.1 mRNA downstream 137123 77019461 ~ 77046440 (+) False LOC110530659
XM_036986294.1 mRNA downstream 137123 77019461 ~ 77046447 (+) False LOC110530659
XM_036986297.1 mRNA downstream 147054 77029392 ~ 77046442 (+) False LOC110530659
XM_036986295.1 mRNA downstream 147836 77030174 ~ 77046442 (+) False LOC110530659
XM_036986296.1 mRNA downstream 147882 77030220 ~ 77046442 (+) True LOC110530659
TU849632 other upstream 174458 76706730 ~ 76707644 (+) False G748432
TU849434 other upstream 429665 76451570 ~ 76452437 (+) True LOC110530655
TU849158 other upstream 487773 76239950 ~ 76394329 (+) True G747987
TU848805 other upstream 766116 76115693 ~ 76115986 (+) True G747680
TU847964 other upstream 1498974 75379502 ~ 75383128 (+) False G746951
TU850161 other downstream 268325 77150663 ~ 77177349 (+) True G748905
TU850174 other downstream 297006 77179344 ~ 77180128 (+) True G748917
TU850224 other downstream 384314 77266652 ~ 77272660 (+) True G748959
TU850462 other downstream 420399 77302737 ~ 77356024 (+) False G749137
TU850453 other downstream 471299 77353637 ~ 77356024 (+) False G749137

Expression Profile