RNA id: TU850693


Basic Information

Item Value
RNA id TU850693
length 238
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G749338
representative True

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 77551788 ~ 77552025 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

acaacaaatggaGCAGTTCCTGGGTACTGTGGGGTACATGTCATTGTTTGGTTTACCAGGCACCCGCATGTTTTGGAACAAAGTCTGCCGAGTGTCCCTAGTAGCTGTCACCATGATACTGAATAGATGGGAGGCTATCAACAATCCCTGAGGTTGACAGGTGGGATCGCAAGCCAAAGATGATCAAAGTCCCCTGCCTTGCTGTGGTGAAAGAATACAACAAGAATATGGGTGGGAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU850692 lncRNA upstream 147 77551334 ~ 77551641 (+) True G749337
TU850645 lncRNA upstream 10307 77536556 ~ 77541481 (+) True LOC110530678
TU850617 lncRNA upstream 101459 77449995 ~ 77450329 (+) True G749277
TU850592 lncRNA upstream 118649 77432779 ~ 77433139 (+) True G749252
TU850464 lncRNA upstream 164966 77385673 ~ 77386822 (+) False LOC110530676
TU850707 lncRNA downstream 21978 77574003 ~ 77575147 (+) False G749347
TU850708 lncRNA downstream 21978 77574003 ~ 77575147 (+) True G749347
TU850751 lncRNA downstream 82542 77634567 ~ 77635923 (+) True G749390
TU850696 lncRNA downstream 142824 77694849 ~ 77763821 (+) False LOC110530680
TU850697 lncRNA downstream 142824 77694849 ~ 77698288 (+) True LOC110530680
XM_021613917.2 mRNA upstream 4772 77543520 ~ 77547016 (+) True LOC110530679
XM_036986328.1 mRNA upstream 10237 77478347 ~ 77541551 (+) False LOC110530678
XM_036986329.1 mRNA upstream 10237 77478347 ~ 77541551 (+) False LOC110530678
XM_021613915.2 mRNA upstream 84551 77462803 ~ 77467237 (+) True LOC110530677
XR_002474571.2 mRNA upstream 164951 77385581 ~ 77386837 (+) False LOC110530676
XM_036986330.1 mRNA downstream 7326 77559351 ~ 77698290 (+) False LOC110530680
XM_036986332.1 mRNA downstream 7326 77559351 ~ 77698290 (+) False LOC110530680
XM_036986333.1 mRNA downstream 7326 77559351 ~ 77698290 (+) False LOC110530680
XM_036986334.1 mRNA downstream 7326 77559351 ~ 77698290 (+) False LOC110530680
XM_036986331.1 mRNA downstream 11145 77563170 ~ 77698290 (+) False LOC110530680
TU850461 other upstream 169177 77353637 ~ 77382611 (+) False G749137
TU850462 other upstream 195764 77302737 ~ 77356024 (+) False G749137
TU850453 other upstream 195764 77353637 ~ 77356024 (+) False G749137
TU850224 other upstream 279128 77266652 ~ 77272660 (+) True G748959
TU850174 other upstream 371660 77179344 ~ 77180128 (+) True G748917
TU850834 other downstream 332212 77884237 ~ 77887356 (+) False LOC110530993
TU851066 other downstream 692185 78244210 ~ 78245615 (+) True G749663
TU852066 other downstream 1245117 78797142 ~ 78797548 (+) True G750533
TU852454 other downstream 1427205 78979230 ~ 78979981 (+) True G750854
TU852557 other downstream 1643245 79195270 ~ 79197378 (+) True G750935

Expression Profile