RNA id: TU852810



Basic Information


Item Value
RNA id TU852810
length 243
lncRNA type intronic
GC content 0.39
exon number 2
gene id G751145
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 79666537 ~ 79667411 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CAGGTGTATGTGAACAGGTGTATAAACCTGGACAGGTGTATGTATCTAAACAGGTGTATGTGAACAGGTGTATAAACCTAGACAGGTGTATGTATCTAAACAGgtgtatgtatctAAACAGGTGTATGTGAACAGGTTTATAAACCTGGACAGGTGTATGTATCTAAACAGGTGTATGTGAGCAGGTGTATAAACCTGGACAGGTGTATGTATCTAAACAGGTGTATGTGAACAGGTGTATAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU852776 lncRNA upstream 25667 79639679 ~ 79640870 (+) True G751121
TU852777 lncRNA upstream 25946 79639921 ~ 79640591 (+) True G751122
TU852775 lncRNA upstream 35988 79629988 ~ 79630549 (+) True G751120
TU852774 lncRNA upstream 39327 79626622 ~ 79627210 (+) True G751119
TU852765 lncRNA upstream 59990 79604916 ~ 79606547 (+) True G751111
TU852824 lncRNA downstream 44154 79711565 ~ 79712188 (+) True G751159
TU852791 lncRNA downstream 47205 79714616 ~ 79716693 (+) True G751127
TU852834 lncRNA downstream 55728 79723139 ~ 79723645 (+) True G751165
TU852884 lncRNA downstream 130567 79797978 ~ 79801420 (+) True G751197
TU852892 lncRNA downstream 141044 79808455 ~ 79809598 (+) False G751202
XM_036986408.1 mRNA upstream 70518 79589373 ~ 79596019 (+) False LOC110530727
XM_036986415.1 mRNA downstream 21856 79689267 ~ 79713549 (+) False LOC110530686
XM_036986418.1 mRNA downstream 21856 79689267 ~ 79713549 (+) False LOC110530686
XM_036986417.1 mRNA downstream 25232 79692643 ~ 79713549 (+) True LOC110530686
XM_021613989.2 mRNA downstream 366213 80033624 ~ 80036953 (+) False LOC110530734
XM_021613987.2 mRNA downstream 366261 80033672 ~ 80036953 (+) False LOC110530734
TU852726 other upstream 96660 79548497 ~ 79569877 (+) True LOC110530726
TU852564 other upstream 319089 79345437 ~ 79347448 (+) True ncana
TU852557 other upstream 469159 79195270 ~ 79197378 (+) True G750935
TU852454 other upstream 686556 78979230 ~ 78979981 (+) True G750854
TU852066 other upstream 868989 78797142 ~ 78797548 (+) True G750533
TU854284 other downstream 963899 80631310 ~ 80634052 (+) True G752357
TU854325 other downstream 1074193 80741604 ~ 80741945 (+) True G752398
TU855294 other downstream 1819409 81486820 ~ 81487610 (+) True G753205
TU855521 other downstream 2115938 81783349 ~ 81802285 (+) True sdhc
TU855496 other downstream 2254751 81922162 ~ 81926159 (+) False G753337

Expression Profile