RNA id: TU858135



Basic Information


Item Value
RNA id TU858135
length 244
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G755493
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 84099160 ~ 84099403 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CAGAAATAGATCTGATCAGGTGATTGTCCATGGATTAATATAGTAACAGAAATAGATCTGATCAGGTGATTGTCCATGGATTAATATAGTAACAGAAATAGATCTGATCAGGTGATTGTCCATGGATTAATATAGTAACAGAAATAGATCTGATCAGGTGATTGTCCATGGATTAATATAGTAACAGAAATAGATCTGATCAGGTGATTGTCCATGGATTAATATAGTAACAGAAATAGTGAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU858118 lncRNA upstream 32091 84066584 ~ 84067069 (+) True G755477
TU858114 lncRNA upstream 40079 84058788 ~ 84059081 (+) True G755473
TU858099 lncRNA upstream 60840 84036350 ~ 84038320 (+) True G755464
TU858088 lncRNA upstream 75354 84023110 ~ 84023806 (+) True G755455
TU858074 lncRNA upstream 100659 83998274 ~ 83998501 (+) True G755443
TU858148 lncRNA downstream 41320 84140723 ~ 84144969 (+) False G755503
TU858146 lncRNA downstream 42965 84142368 ~ 84144969 (+) False G755503
TU858147 lncRNA downstream 42965 84142368 ~ 84232804 (+) True G755503
TU858165 lncRNA downstream 71069 84170472 ~ 84170753 (+) True G755519
TU858218 lncRNA downstream 138643 84238046 ~ 84238489 (+) True G755566
XM_021614101.2 mRNA upstream 146427 83950870 ~ 83952733 (+) True tceanc2
XM_021614096.2 mRNA upstream 180253 83913983 ~ 83918907 (+) False lrrc42
XM_021614095.2 mRNA upstream 180253 83913996 ~ 83918907 (+) True lrrc42
XM_021614093.2 mRNA upstream 195879 83895686 ~ 83903281 (+) False LOC110530814
XM_036986572.1 mRNA downstream 337085 84436488 ~ 84931644 (+) False LOC110492646
XM_036986574.1 mRNA downstream 337085 84436488 ~ 84931644 (+) False LOC110492646
XM_036986575.1 mRNA downstream 337085 84436488 ~ 84931644 (+) False LOC110492646
XM_036986576.1 mRNA downstream 337085 84436488 ~ 84931644 (+) False LOC110492646
XM_036986577.1 mRNA downstream 337085 84436488 ~ 84931644 (+) False LOC110492646
TU858056 other upstream 128463 83969378 ~ 83970697 (+) True G755428
TU857978 other upstream 193548 83903635 ~ 83905612 (+) True LOC110530814
TU857984 other upstream 209523 83886814 ~ 83889637 (+) True G755363
TU857995 other upstream 312219 83785960 ~ 83786941 (+) True LOC110529145
TU857907 other upstream 439114 83658097 ~ 83660046 (+) False G755298
TU858237 other downstream 162584 84261987 ~ 84262966 (+) True G755585
TU858258 other downstream 204067 84303470 ~ 84308274 (+) True G755602
TU858875 other downstream 459383 84558786 ~ 84561891 (+) True G756134
TU859041 other downstream 777591 84876994 ~ 84878079 (+) True G756271
TU859074 other downstream 836663 84936066 ~ 84937744 (+) False G756298

Expression Profile